PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945115.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 526aa    MW: 58026.3 Da    PI: 4.7819
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945115.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.52.4e-341031942102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+++++ed++l+ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F++gk++ll++
  XP_022945115.1 103 FLWKTFDLVEDPALDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFANDAFQRGKRHLLKN 188
                     99***************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+ks
  XP_022945115.1 189 IQRRKS 194
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MNPLEEGDSV SPIGANSSSA QSDSDAAGVS SDPELMMSIG FSSSPTGGGS WAENPMPSSS  60
AHNLFDVMPK PDKGASDPFS MWGSGTDVPQ PLEGLHGQLV PPFLWKTFDL VEDPALDPIV  120
SWGSAGQSFV VWDPVEFSRV ILPSNFKHNN FSSFVRQLNT YGFRKIDADK WEFANDAFQR  180
GKRHLLKNIQ RRKSPHSQQV GSLIGPSTGP GKSGLEDEIG RLKKERSMLM QEVVELQKEQ  240
KGTAQHVKTV NRRLQSAEQK QKQMISFLAK LLQNPEFLFR LQKKKEQRDI DSPRMKRKFV  300
KQHQHETDGF TPFMEGQIVK YQPDWGSHAT SELNPSLLEG PAAYLLQGVS GDLGSIPESM  360
SNFQYENDPS RDVITSEELA FHHGIVKPTE LSVEPSNMSM EDQHSKGKAI GSSSQDVNPD  420
YFVSLAESIQ QFSHLGTGNV IKPEEIWSTG LNVDTGTSSS NTELWSNPVD FEDPFLQGSS  480
GLSPFWDLGS LQAGDSHTNT WSASGFPFDD PDSRACPENT DNSEDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.13e-93HSF family protein