PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944614.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 181aa    MW: 19946.6 Da    PI: 9.9574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944614.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-1865115155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr p+    r  r +lg+f ta +Aa a+++a+++++g
  XP_022944614.1  65 CNYRGVRQRT-WGKWVAEIRAPK----RgSRLWLGTFPTAIDAALAYDEAARAMYG 115
                     56*****999.**********83....46************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MPKLEKLQTR RPGSLSVAET LAKWKDYNDH LDSCTDEAKL TRRVPAKGSK KGCMKGKGGP  60
ENMRCNYRGV RQRTWGKWVA EIRAPKRGSR LWLGTFPTAI DAALAYDEAA RAMYGTSARL  120
NFPNISIPTL LKEKESPPTK ESPSPEIKRS SISSLGSTSL SLSYESTITS DHSEEGAAED  180
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.26e-31ERF family protein