PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944561.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 342aa MW: 38400.1 Da PI: 5.9106

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944561.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.9	8.6e-49	17	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+P+deel+ +yLkkk++g++ ++ +vi+e++i+k+ePwdLp k + +++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_022944561.1 17 MFPGFRFSPKDEELILFYLKKKLQGSDDSV-DVISEIEICKFEPWDLPGKSRIpSDNEWFFFSPRGRKYPNGTQNKRATELGYWKATGKERNVKS 110 579**********************999.99***********543333789********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+k+tLvf+ grap+ge+t+W+mhey l XP_022944561.1 111 -GSEIIGTKRTLVFHLGRAPTGERTEWIMHEYCL 143 .9****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGGVSREAEM SMAALSMFPG FRFSPKDEEL ILFYLKKKLQ GSDDSVDVIS EIEICKFEPW 60 DLPGKSRIPS DNEWFFFSPR GRKYPNGTQN KRATELGYWK ATGKERNVKS GSEIIGTKRT 120 LVFHLGRAPT GERTEWIMHE YCLNDTSQDS NSMVVCRLRK NNDFRRNNSD KAGSSKVQGS 180 GEDGDGGVGQ KVGGESDRLS KNCSSSFDSH SLEQTDSGIE FRRKETSDPA LHESLSREKG 240 NGEDEELYAD LLKDDIITLD DNLLSATHNP TPMIMNFSES EKYTHLPIPT ALADAEASPF 300 LGNTTRRIKL KKQEHNNVYI NLGLLTFLLI IFIVSLHLLC NL

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGGVSREAEM SMAALSMFPG FRFSPKDEEL ILFYLKKKLQ GSDDSVDVIS EIEICKFEPW  60
DLPGKSRIPS DNEWFFFSPR GRKYPNGTQN KRATELGYWK ATGKERNVKS GSEIIGTKRT  120
LVFHLGRAPT GERTEWIMHE YCLNDTSQDS NSMVVCRLRK NNDFRRNNSD KAGSSKVQGS  180
GEDGDGGVGQ KVGGESDRLS KNCSSSFDSH SLEQTDSGIE FRRKETSDPA LHESLSREKG  240
NGEDEELYAD LLKDDIITLD DNLLSATHNP TPMIMNFSES EKYTHLPIPT ALADAEASPF  300
LGNTTRRIKL KKQEHNNVYI NLGLLTFLLI IFIVSLHLLC NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-83	NAC family protein