PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944379.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 515aa MW: 57854.1 Da PI: 7.3094

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944379.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022944379.1 31 KKRKLKTPTQLIALEKFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 86 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALEKFYND HKYPTEEMKS 60 QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDHGSGL AQDSCGSTKN 120 GDYWHVDPRE VESQKPYGRE LATDNVLERR SHYAENVSNM ENTSSESSSS LKDRLLSQSE 180 NPYDTEVSQY LTHDSAFPPS NPKALNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE 240 DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNALLPRSP DTLTMKKQRA LVSRYEVLSS 300 NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKSSNYYN KTEPFPRQNS PLNMYEESGG 360 LTLSSSSKRD HRMNSDYNVP RSRTGSVSNN HGSYSSKVAS EQTEMPLHNR GSVGSKSFCR 420 SGYLDYNPKK MPKEMFNGEE KAVNESSDPV RGKIPPTNEL TVAYRCPLDL PRSGYAAKAS 480 FSEKPGRKNH TSRSTMEMPY SFTVDEAEDT SSSLD

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALEKFYND HKYPTEEMKS  60
QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDHGSGL AQDSCGSTKN  120
GDYWHVDPRE VESQKPYGRE LATDNVLERR SHYAENVSNM ENTSSESSSS LKDRLLSQSE  180
NPYDTEVSQY LTHDSAFPPS NPKALNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE  240
DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNALLPRSP DTLTMKKQRA LVSRYEVLSS  300
NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKSSNYYN KTEPFPRQNS PLNMYEESGG  360
LTLSSSSKRD HRMNSDYNVP RSRTGSVSNN HGSYSSKVAS EQTEMPLHNR GSVGSKSFCR  420
SGYLDYNPKK MPKEMFNGEE KAVNESSDPV RGKIPPTNEL TVAYRCPLDL PRSGYAAKAS  480
FSEKPGRKNH TSRSTMEMPY SFTVDEAEDT SSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-84	HB-other family protein