PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943620.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 301aa    MW: 34796.2 Da    PI: 7.4535
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943620.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.59.3e-48201483128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     pGfrFhPtdeelv++yL++kve+k++ l e ik++diy+++PwdLp  + +a+eke+y F+kr +ky+++ r+nr+t +g+Wkatg dk+++s++
  XP_022943620.1  20 PGFRFHPTDEELVDYYLRRKVEKKSIAL-ELIKQIDIYRHNPWDLPyGSGAAGEKECYVFVKRGRKYKNSVRPNRVTGAGFWKATGIDKPIYSQG 113
                     9*************************99.89***************556667899**************************************95 PP

             NAM  97 gel...vglkktLvfykgrapkgektdWvmheyrl 128
                     ge    +glkktLvfykg+a +g kt+W+mhe+rl
  XP_022943620.1 114 GEPnrcIGLKKTLVFYKGSAGRGLKTEWMMHEFRL 148
                     554566***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MATLPTPLDF DTDDYQFPLP GFRFHPTDEE LVDYYLRRKV EKKSIALELI KQIDIYRHNP  60
WDLPYGSGAA GEKECYVFVK RGRKYKNSVR PNRVTGAGFW KATGIDKPIY SQGGEPNRCI  120
GLKKTLVFYK GSAGRGLKTE WMMHEFRLPP NTSSNSHDSD AAEIWTLCRI FKRNIVCRRY  180
TPNWKEIPAS NRERKSTKTV DHQAYDDGDG RETYISFSSN PFNGFEEKKP FLVCDERKQW  240
EELTMMMMKK KNSEAAEVIS VSPPLSVNQS PASSGFDEDD WDELRSIVDF AFDPFFNNPS  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-76NAC family protein