PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943534.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 436aa MW: 48301.2 Da PI: 6.5794

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943534.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.3	3.5e-28	160	214	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++v+SHLQkYR++ XP_022943534.1 160 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIECLTRHNVASHLQKYRSH 214 5689***************.******************************86 PP
2	Myb_DNA-binding	40.4	7e-13	163	212	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++qky+ XP_022943534.1 163 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiECLTRHNVASHLQKYR 212 57******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MLAVSPVRSG NKDEEQGEVE SFSIGGDDFP GFDDDTNLLD SINFDDFFVG INDGDVLPDL 60 EMDPEILAEF SVSGSEESEV NASVSLEKFD DNSKVDNRGD EEKDLDSRSC AQGDQEIVSK 120 RDESATPRDI VEVNDLVKHG DKIKNRKSSS QSKNSQGKRK VKVDWTPELH RRFVQAVEQL 180 GVDKAVPSRI LELMGIECLT RHNVASHLQK YRSHRKHLLA REAEAASWSQ RRQMYGSASG 240 GNAGKRELSP WSAPTMGFPP MTPMHPHFRP LHVWGHPTVD QSLMHVWPKH LPHSPSPPPP 300 PTTPPSSWPH AAAPPPPPDW HHHHHHHHQR VPNALTPRTP CFPQPIPTTR FGGAAFSVIP 360 PPHPMYKVEP TTTVGRSPTH LPLDSYPSKE SIDSAIGDAL TKPWLPLPLG LKPPSLDSVK 420 VELQRQGIPK IPPTCA

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MLAVSPVRSG NKDEEQGEVE SFSIGGDDFP GFDDDTNLLD SINFDDFFVG INDGDVLPDL  60
EMDPEILAEF SVSGSEESEV NASVSLEKFD DNSKVDNRGD EEKDLDSRSC AQGDQEIVSK  120
RDESATPRDI VEVNDLVKHG DKIKNRKSSS QSKNSQGKRK VKVDWTPELH RRFVQAVEQL  180
GVDKAVPSRI LELMGIECLT RHNVASHLQK YRSHRKHLLA REAEAASWSQ RRQMYGSASG  240
GNAGKRELSP WSAPTMGFPP MTPMHPHFRP LHVWGHPTVD QSLMHVWPKH LPHSPSPPPP  300
PTTPPSSWPH AAAPPPPPDW HHHHHHHHQR VPNALTPRTP CFPQPIPTTR FGGAAFSVIP  360
PPHPMYKVEP TTTVGRSPTH LPLDSYPSKE SIDSAIGDAL TKPWLPLPLG LKPPSLDSVK  420
VELQRQGIPK IPPTCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	2e-79	G2-like family protein