PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943416.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 333aa MW: 36759.8 Da PI: 8.5836

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943416.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	90	134	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_022943416.1 90 DPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVES 134 79****************************************986 PP
2	QLQ	60.5	4.6e-21	28	64	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT Q+q+L++Q+l++Ky++a++PvPp+L+++iq+ XP_022943416.1 28 SPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQR 64 89*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MNNSGGGGED GSRTVAATAS GMMGMNRSPF TVLQWQELEH QALIFKYMMA GLPVPPDLVL 60 PIQRSFESIS HRFFHHPTMA YCSFYGKKVD PEPGRCRRTD GKKWRCSKDA YPNSKYCERH 120 MHRGRNRSRK PVESQTMTQS SSTATSLIAT GSSSTGAGSF HGLPLNALSN SEATTTRTSQ 180 PDYPLDSIPY GIPSKDYRYL QGLRPEAGVH SFFSEASGSS RAVQMDAPMD NTWPIMPSRS 240 PSFPASKSTE NSIFQSGYLQ HSFFGGEYPS GETLKQEAQS LQPLFDEWPR TRESWTGLDE 300 RSNQTSFSTT QLSISIPMSS SDLSTTSSKS PHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	8e-45	GRF family protein