PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942461.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 404aa MW: 46844.9 Da PI: 4.6315

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942461.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.8	7.1e-33	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkklye+++de+++++isws + +sf +ld+++f+ ++LpkyFkhsnf+SF+RQLn+YgF+k++++ weF+ + F kg+k+ll++ XP_022942461.1 16 FLKKLYEMVDDEATNSIISWSPRDDSFTILDMTHFSVHLLPKYFKHSNFSSFMRQLNIYGFRKIETDC---------WEFATDGFVKGQKHLLKN 101 9******************999************************************9987.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k+ XP_022942461.1 102 IYRRKN 107 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MVKSAGERQG SSVAPFLKKL YEMVDDEATN SIISWSPRDD SFTILDMTHF SVHLLPKYFK 60 HSNFSSFMRQ LNIYGFRKIE TDCWEFATDG FVKGQKHLLK NIYRRKNIQG TDQRKASQPQ 120 DNSEGQGELH DYTGLWKEVE NLKIDKNAVM QELVKLRQQQ ETSENKMLLL RDRLQGMEKN 180 QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADAGNMLEQ IPDDNQVPSN GLIVRYQRPI 240 DELPAPLLPP VSGLGKQQES DPFPDGMKDF FLNSDFMKVL MDEKLDNHSQ FVLPDVQDVA 300 WEQLLLASTV SCNSDNVRKV DDEREPMDHE DHELDMETID TRTHEENLQD FELLIKQMEK 360 GENFGLQPRL DESYIEKSNT VNLMELMASD QEILYETPAK MQGH

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MVKSAGERQG SSVAPFLKKL YEMVDDEATN SIISWSPRDD SFTILDMTHF SVHLLPKYFK  60
HSNFSSFMRQ LNIYGFRKIE TDCWEFATDG FVKGQKHLLK NIYRRKNIQG TDQRKASQPQ  120
DNSEGQGELH DYTGLWKEVE NLKIDKNAVM QELVKLRQQQ ETSENKMLLL RDRLQGMEKN  180
QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADAGNMLEQ IPDDNQVPSN GLIVRYQRPI  240
DELPAPLLPP VSGLGKQQES DPFPDGMKDF FLNSDFMKVL MDEKLDNHSQ FVLPDVQDVA  300
WEQLLLASTV SCNSDNVRKV DDEREPMDHE DHELDMETID TRTHEENLQD FELLIKQMEK  360
GENFGLQPRL DESYIEKSNT VNLMELMASD QEILYETPAK MQGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	7e-99	HSF family protein