PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942389.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family E2F/DP
Protein Properties Length: 349aa    MW: 38525 Da    PI: 5.1527
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942389.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2795177271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_022942389.1  95 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnslatpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 177
                     689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGTRTQQPCH DDDDDDLPGG PGPAATTISG QSVSMSGSVG SPSNRSEQTM ATPASDNTFL  60
RLNNLDIHGD EAGSQPPTAN VKKKRGQRAV GGDKSGRGLR QFSMKVCEKV ESKGRTTYNE  120
VADELVAEFA DPGNSLATPD QQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR  180
TSLNDIEELK AERLGLRNRI EKKAAYLQEL EEQYVGLQNL IQRNEQLFSS ENAPSGGVSL  240
PFILVQTRPH ATVEIEISED MQLVHFDFNS TPFELHDDNY VLKAMKFCDR PQCDNTAQNF  300
APDAGEGSSM SGMYQPPQIP LPSMSNTPVR TPTSPPLPGI IKARVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-150E2F/DP family protein