PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942387.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 281aa    MW: 30903.3 Da    PI: 4.9112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942387.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-19145193355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+W+AeIr p     +  +r++lg+f taeeAa+a+++a+ +++g
  XP_022942387.1 145 YRGVRQRP-WGKWAAEIRNP-----KlaTRVWLGTFNTAEEAARAYDKAAWEFRG 193
                     9*******.**********9.....557*********************988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSSLKRSRST EFSESYFSLP PPYLRPISAD QELSVIVTAL TSVVSGTAFD SDFMENRFWH  60
DFQIPPPTFD CATSAASASA SDSFSVSGTT SSISCSSTDA ILGPSVFETC SVCRIDGCLG  120
CDFFPPSSQV DNEKKSGKKR SKKTYRGVRQ RPWGKWAAEI RNPKLATRVW LGTFNTAEEA  180
ARAYDKAAWE FRGPRAKLNF PFTDDSLRMM SSEQQEQRPE IEMSKNSSNS TAATAAIGVG  240
NDDEIWGKIA KDEADQWMSS LMTYHGGESP DSASTGIWEF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-27ERF family protein