PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941479.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 399aa    MW: 43541 Da    PI: 7.7431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941479.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-052873251255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022941479.1 287 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 325
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MESTANLHQL QDQLLVPPPP SSSPSSSSPP IVPSCFSLPS THGWTPNISL NNNNTCNYNS  60
RVFNGLSSSV PVRSDCGVKN TNSSMLLQDL GFQWNGASSS GSFFSHFLHA GGKIKEEMLN  120
SPSTNQDFHP FPSTNHVKNN DSDLNDPSHK LFIKTQINGG DHTEPGEFFN KIYPSINVSD  180
WNLSSPPPPP FSNSLDLNLQ TPPDLFHSQD SFGIFRQTLS DFHDQIHPPA ILPCISSKVT  240
TPFSAELTEP KRPCTCIRPM LNQPSPPPPL KKSRLDSRAS CPPFKVRKEK LGDRIAALQQ  300
LVAPFGKTDT ASVLMEAIGY IKFLQNQVET LSVPYMKPSC NKTTRPTYRS PVEGGHEGQL  360
DRDLRSRGLC LVPLGCLSYV AGDGGGIWTP PGFSGGTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.14e-48bHLH family protein