PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022941105.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 303aa    MW: 33090.9 Da    PI: 7.2191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022941105.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.2e-20134183255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+ta+eAa a+++a+ kl+g
  XP_022941105.1 134 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAQEAALAYDKAAFKLRG 183
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAAAMDFYSE GSQTDHFGGE LMEAIVPFIK VASSSSSSVS SSSSSSSFNF SHSVPQQCSN  60
GCSTSMNSEF SNGFSTQTLI GNEQPSQIFH FQTPLPFAYG KPSEQLNQQT TPMFLCPKAI  120
PMKQVGSSSK PTKLYRGVRQ RHWGKWVAEI RLPRNRTRLW LGTFDTAQEA ALAYDKAAFK  180
LRGDSARLNF PHLKHQGSCV EGEFGAYRPL HSSVDAKLQA ICDNLAAPPP KGSSKKSRSQ  240
SSSSTVVEAA AVKVESDGSA GSSPLSDLTF PDFTELPWEH NQAWENSMLE KYPSEIDWAS  300
ILP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-73ERF family protein