PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022939877.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 398aa MW: 44851.2 Da PI: 5.6994

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022939877.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.2	1.8e-28	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..... 82 lp+G++F+P+dee++ ++L++k++ + ++++ +++ +i++++P++Lp v ++ ++++fF+k++++yatg+rk+r+++sg+ XP_022939877.1 55 LPAGVKFDPSDEEIM-DHLAAKCTVGNlkphalIDEFIPtLETDqGICYTHPENLPG-VCKDGNDVHFFHKTSNAYATGQRKRRKIESGRdssle 147 799********99.999999998885555442222221222236******4.446789****************97755444445 PP NAM 83 ...WkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 W++tgk++++++ +g ++g kk++ +y+ k+ek++Wv+h+y+l XP_022939877.1 148 hfrWHKTGKTRALIE-EGVHKGWKKIFSLYRSskGGLKPEKSNWVIHQYHL 197 555*******9.999*******6511345778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MARSWIIDSR TIARKVKNVS RSSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK 60 FDPSDEEIMD HLAAKCTVGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VCKDGNDVHF 120 FHKTSNAYAT GQRKRRKIES GRDSSLEHFR WHKTGKTRAL IEEGVHKGWK KIFSLYRSSK 180 GGLKPEKSNW VIHQYHLGTE EDEKEGEYVL SKISYQQPKQ CIKSGDNMLI EDFDAMLRHT 240 SPRTPKSNPP VPPRSGKSFV SNAVAENSLP QSFAKGEELA PETSRVSYPS ISSENNLGYH 300 AWLAGESQDI DNVELHYLED KLLCNEVLDS CAVMSNNQLN QMPFSLSGSN TCHEFMNDNV 360 PCGIADLENL ELDTPPDFHL SDLQFGSQES IFDWIDRI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MARSWIIDSR TIARKVKNVS RSSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK  60
FDPSDEEIMD HLAAKCTVGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VCKDGNDVHF  120
FHKTSNAYAT GQRKRRKIES GRDSSLEHFR WHKTGKTRAL IEEGVHKGWK KIFSLYRSSK  180
GGLKPEKSNW VIHQYHLGTE EDEKEGEYVL SKISYQQPKQ CIKSGDNMLI EDFDAMLRHT  240
SPRTPKSNPP VPPRSGKSFV SNAVAENSLP QSFAKGEELA PETSRVSYPS ISSENNLGYH  300
AWLAGESQDI DNVELHYLED KLLCNEVLDS CAVMSNNQLN QMPFSLSGSN TCHEFMNDNV  360
PCGIADLENL ELDTPPDFHL SDLQFGSQES IFDWIDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-93	NAC family protein