PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022938618.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 387aa    MW: 41217.1 Da    PI: 5.1676
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022938618.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20189238255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_022938618.1 189 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 238
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MCSLKVANPR GIGSDLAQFP SGGAGDGDGD NGGDDPHRLL FYSQQDDGDY YSAVGEVSTI  60
VSTLTNVMSG QGAGEWSYGS SQGFAAGFVS SSSSSSSASA SASASASASS PLSAYSSGSE  120
RSYASAMSSC GGYWVGQKRM REEESVQVKE EIPIPIPIPN TVASNPAAVL AFPVSSNEEV  180
AATGERRRRY RGVRQRPWGK WAAEIRDPHK AARVWLGTFD TAEAAARAYD EAALRFRGNR  240
AKLNFPEHVR LLPPTQDISA TASSASPLFT PPQAAAFQTQ NYRDYIEYSN LLQNSSEFLG  300
QPSSLVQQMF YNAQLPPFPS SSSPVPAPAP SMSSVSNSVF FPPPPQQQQM GFFRQQPPQN  360
QNQGGSNYFP ATSWNDPGGQ YPPPSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.16e-16ERF family protein