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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022936858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Nin-like | ||||||||
Protein Properties | Length: 917aa MW: 102121 Da PI: 6.6305 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.7 | 5.6e-29 | 594 | 643 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k+i+l++l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022936858.1 594 KTITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 643 89**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 917 aa Download sequence |
MEDCMLSPAT MLDAPAEAAM DLDYMDGLLL EGCWLETAEG TEFLHPSTAS FGANLDPLIA 60 WPATDMNGDF HMSQITRANQ EEPRRILTDE ASMGRGRVDM EQEGCSGQSE NHGFEGSELC 120 RRLWIGPGDH LGSASSVMEK LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR SVLITNDLPF 180 SQNSSCTRLT KYRDVSVKYE FTADDDSKNA LGLPGRVFSR KVPEWTPDVR FFRSDEYPRV 240 NHAHEHDVRG TVALPIFEQG SKNCLGVIEV VMVTQQIKYG SELESVCKAL EAVKLRSSDV 300 IGHPDKKQVF NRSNEAVLLE IQNTLKSACE THGLPLAQTW ASCIQQNREG CRHSDENYSC 360 CVSTVDRACF VADPRVQEFH EACSEHHLLK GEGIVGMAFK SNEPCFSSDI TSFCNTEYPL 420 SHHAKLFGLH AAVAIRLRCI YISKTDFVLE FFLPVDCIDP EEQRVLLTSL STIIQRSCRS 480 LRLVNDKECR EENMQQSCRR SKVEHHQLEM SHPTNSLLTS SVQNIQQQSG FVSLFQDGKT 540 SEILSSSGYQ HHELNYNLNG VVEDSEECAT VGNSCFSDTG LGRTGEKRRT KVDKTITLQV 600 LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA 660 SGAFQIGSLY SNFQDLASPN LSGSGSGPVL SAKMGDCMKT SSNPNEVGMS NLQGGGASKS 720 PSSSCSQSSS SNQCFSSRSH KNVGHWNKGG SEDQMGGGEN PCDGELKRVK SEVEIHVSIM 780 EGSNIPRRSQ SCKSLCKHPA TECLVHTAKE GDGMAERVEV QKVKVSYGEE KIRFRVHNQW 840 RYEELLNEVG KRFSISDMTK FDLKYLDDES EWVLLTSDTD LQECFHVYKS CRIQTIRLLV 900 QESRRHKRNC VASGGFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20640.2 | 0.0 | Nin-like family protein |