PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936573.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 492aa MW: 56022.9 Da PI: 6.6298

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936573.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.5	2.7e-49	13	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeel+++yLk+k+ g++ + + i++vdi+k+ePwdLp + +++e+ew+fF+ +d ky++++r+nratk+gyWk+tgkd+++l XP_022936573.1 13 LPVGFRFHPTDEELINHYLKNKMLGRESLV-DYIRQVDICKYEPWDLPcLsNDHTSEQEWFFFAAQDLKYSNSRRSNRATKTGYWKSTGKDRKIL 106 79***********************777.99***********5234445778*********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++l+g+kktLvfy+gr ++g +t+Wv+hey+l XP_022936573.1 107 DPrTKKLIGTKKTLVFYRGRVSNGIRTNWVIHEYQL 142 967778**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MADCIVLPSG YLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKYEPWDLPC 60 LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILDPRT KKLIGTKKTL 120 VFYRGRVSNG IRTNWVIHEY QLHSDPQFAH LRPFVICLLK KKLDENDVLV CDEAEQNGPM 180 NLTFDNEVSV NQNKEVLGYD FSELESLLFS DREPISMDFQ ANNSHVTQVN EPNDEAIDIE 240 EIYFHEGTPN SSISDFNWKE YLEMVEEDQG GALNGDTGMY AILNMQGRST SHSMFDEHSS 300 RVPTQTTPIL KESRRSPLTS KIFKYGGEED LSSVRPRGDE LQTNGISYLS DDPDRETITL 360 RFQGQPRSDK VVNHAQDSQN IQWKRKTQLQ VVSSPDKAKA VSKWKKVNGA AATSNKDIVV 420 DRESEVKSLV AHQSSSTGRG SVESRGKRCS SILTTKCIHH RSSPASAYVA RVCIGLILFF 480 VVARDMLLDG NW

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MADCIVLPSG YLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKYEPWDLPC  60
LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILDPRT KKLIGTKKTL  120
VFYRGRVSNG IRTNWVIHEY QLHSDPQFAH LRPFVICLLK KKLDENDVLV CDEAEQNGPM  180
NLTFDNEVSV NQNKEVLGYD FSELESLLFS DREPISMDFQ ANNSHVTQVN EPNDEAIDIE  240
EIYFHEGTPN SSISDFNWKE YLEMVEEDQG GALNGDTGMY AILNMQGRST SHSMFDEHSS  300
RVPTQTTPIL KESRRSPLTS KIFKYGGEED LSSVRPRGDE LQTNGISYLS DDPDRETITL  360
RFQGQPRSDK VVNHAQDSQN IQWKRKTQLQ VVSSPDKAKA VSKWKKVNGA AATSNKDIVV  420
DRESEVKSLV AHQSSSTGRG SVESRGKRCS SILTTKCIHH RSSPASAYVA RVCIGLILFF  480
VVARDMLLDG NW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	2e-52	NAC family protein