PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935699.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 177aa    MW: 20854.2 Da    PI: 10.0374
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935699.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1851.2e-2612100290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA++vGF +r+ + ++s+++g+i  r++ C+keg+  + + k    r++r++tr gCka+++vk +k gkw++tk+++eHnH+l+
  XP_022935699.1  12 FYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKFGKWVITKFVKEHNHPLV 100
                     9**************************************999999989***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEFESEDAAK IFYDKYARQV GFVMRVMSCR RSEKDGRILA RRLGCNKEGY CVSIRGKFGA  60
VRKPRPSTRE GCKAMIHVKY DKFGKWVITK FVKEHNHPLV VSPREARQTM DEKDKQIQEL  120
TIELRNKKRL CSTYQEQLAA FMKIVEEHTD QLSRKVQNVV TNLKEFESIE QELLHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-110FAR1 family protein