PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934366.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 313aa MW: 33638.3 Da PI: 7.9116

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934366.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.5	8e-37	65	197	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i++ tgt++++as+ a++ s+s++ s + XP_022934366.1 65 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSaglhqkle 159 789******************************************************************99955555555553333335666666 PP TCP 89 .....................................k 89 XP_022934366.1 160 efggggssranwgnlgrphlaatattglwpssvsgfgY 197 77777766666766665555554444444444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MDPKTSSATK QPQEVVPNFL KLPQEQQQEQ EQEQRQSIMG ENKPAEIKDF QIAVAEKEEG 60 KKQLAPKRSS NKDRHTKVEG RGRRIRMPAL CAARIFQLTR ELGHKSDGET IQWLLQQAEP 120 SIIAVTGTGT IPASALAAAA GSVSQQGASL SAGLHQKLEE FGGGGSSRAN WGNLGRPHLA 180 ATATTGLWPS SVSGFGYQSS TAAAAAAAAQ SATNLANETS NYFHKLGFPP FDLTSTNMGP 240 MSFTSILGGN AQQLPGLELG LSQDGHIGVI NPQTLNQIYQ QMGQARVHQH HHQHQQQQQQ 300 QQPPAKDDSQ DSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-72	TCP family protein