PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933445.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 291aa    MW: 33180.3 Da    PI: 5.6833
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933445.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.77.4e-33151072103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F+ k+y++++d+ ++++i+w + +nsf+vld+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +++ +ll++
  XP_022933445.1  15 FVLKTYQMVNDPLTDTFITWGSANNSFLVLDPLHFSHTLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANQWFLRDQFHLLRN 100
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i r+k++
  XP_022933445.1 101 IVRRKQS 107
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDANNESAND IVAPFVLKTY QMVNDPLTDT FITWGSANNS FLVLDPLHFS HTLLPAYFKH  60
NNFSSFVRQL NTYGFRKVDP DRWEFANQWF LRDQFHLLRN IVRRKQSTNS SLREMGDEEL  120
VTEIARLRKE QKVLEEELEG MKKRLETTEK RPQQMMAFLH KVAEDPEILP RMMLQKDRPG  180
AHIGDKKRRL MISSSSSSPS TTTVTTTSLE AEEIEEEGSW RRNFSSPEVS GPAGFCNHVQ  240
GWNLAEAEAG GMDISRSRSG GEMKNSTEMM GTVEESNPAP PYPFSLFGCG F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-82HSF family protein