PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932691.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 967aa MW: 106543 Da PI: 5.1272

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932691.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.6e-29	579	629	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022932691.1 579 EKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 629 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 967 aa Download sequence
MENPFSSKEE GMMGYWGPSR TQAETMNSTD AGMRILSPED VLPTFSDMMN FDSYAAIDQI 60 FTSCGFSSMP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGA SISMANSFTC GDKVMFQLPD 120 TEFGVSSISD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA 180 QVWVPVKHGD QFFLSTSEQP YLLDQMLTGY REVSRSFRFS AEGKLGSLLG LPGRVFTSKL 240 PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA 300 EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRAVCHAHR LPLALTWIPC 360 CYSFDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI 420 AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP 480 VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGFT SMRNSQSTVT 540 DSETRVSNSI NNGAEAECPE KQMTDGSRKQ GEKKRSTSEK NVSLSVLQQY FSGSLKDAAK 600 SIGVCPTTLK RICRQHGILR WPSRKINKVN RSLRKIQTVL DSVKGVEGGL KFDPTTGCLM 660 AGSLIPELNA QNSLLFSDNN PAIPNLDPFL HDVNSVPSAP FNTQNSAIKL EMDESSVSIS 720 QRTSSRSVLI PEKEPNVRHR DCSEGLEAAG VDAASCQLAD LDMVGWDVQG NASASIAAKK 780 SDRLDFVKND LRSGDADCQF MAKSSISFAA ADEVGTVLNE HYQPTTSSMT DSSNGSGLMI 840 HGSSSSSQSV ERKHLPEKVG SVDSESKIIV KASYKDDTVR FKFDPCLGYL QLYEEVGTRF 900 KLNQGTFQLK YLDDEKEWVM LVSNSDLQEC LEVMDEIGTR NVKFLVRDIA CAVGSSGSSS 960 CFLSGCS

Sequence ? help Back to Top

Protein Sequence Length: 967 aa Download sequence

MENPFSSKEE GMMGYWGPSR TQAETMNSTD AGMRILSPED VLPTFSDMMN FDSYAAIDQI  60
FTSCGFSSMP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGA SISMANSFTC GDKVMFQLPD  120
TEFGVSSISD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA  180
QVWVPVKHGD QFFLSTSEQP YLLDQMLTGY REVSRSFRFS AEGKLGSLLG LPGRVFTSKL  240
PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA  300
EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRAVCHAHR LPLALTWIPC  360
CYSFDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI  420
AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP  480
VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGFT SMRNSQSTVT  540
DSETRVSNSI NNGAEAECPE KQMTDGSRKQ GEKKRSTSEK NVSLSVLQQY FSGSLKDAAK  600
SIGVCPTTLK RICRQHGILR WPSRKINKVN RSLRKIQTVL DSVKGVEGGL KFDPTTGCLM  660
AGSLIPELNA QNSLLFSDNN PAIPNLDPFL HDVNSVPSAP FNTQNSAIKL EMDESSVSIS  720
QRTSSRSVLI PEKEPNVRHR DCSEGLEAAG VDAASCQLAD LDMVGWDVQG NASASIAAKK  780
SDRLDFVKND LRSGDADCQF MAKSSISFAA ADEVGTVLNE HYQPTTSSMT DSSNGSGLMI  840
HGSSSSSQSV ERKHLPEKVG SVDSESKIIV KASYKDDTVR FKFDPCLGYL QLYEEVGTRF  900
KLNQGTFQLK YLDDEKEWVM LVSNSDLQEC LEVMDEIGTR NVKFLVRDIA CAVGSSGSSS  960
CFLSGCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein