PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931826.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 290aa    MW: 33084.9 Da    PI: 6.8012
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931826.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-102470347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+eE +++ +a +++  +   +W ++a++++ g+t  +++ ++q +
   XP_022931826.1 24 QWTPEENKRFENALALYDEDtsdRWLKVAAMIP-GKTIGDVVKHYQEL 70
                     6********************************.***********975 PP
2Myb_DNA-binding46.77.6e-15133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022931826.1 133 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 177
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEFLSPASYL RNSNWLFQET KETQWTPEEN KRFENALALY DEDTSDRWLK VAAMIPGKTI  60
GDVVKHYQEL EEDVCDIEAG LIPIRGYDNR HSFTLERVDS SHGFDGLSHF YGAEFKTGTS  120
TTPSDHERKK GIPWTEEEHR QFLMGLKKYG KGDWRNISRN FVTTRTPTQV ASHAQKYFIR  180
QLTGGKDKRR SSIHDITTVN LPDMKSPSGD SNRPPSMATQ LHQLSKMVGR AEQPFDWKCS  240
NQGMARVLES TTTTTTNGNM LDAAQLLDHN TNHGSAIAPY YTIFEMPHYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-106MYB family protein