PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931386.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 1004aa MW: 110899 Da PI: 5.5835

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931386.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.5e-29	599	650	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022931386.1 599 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 650 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MTEPDSNHPS TLFPKSTHRS APDDRTQLMD FDLDLDFPWS LDQIPSFASN PMSPFLVSTS 60 DHLGSPLWAF SEPDDDDDSK FPASTCSVLG TSNSNSVPQK PSENHKFKIL PVQSSSWGLI 120 PSENPDGYCL IKEKMAQALR YIKESSDQHV LAQVWAPVKS GGKLVLSTSG QPFVLDSQSN 180 GLHQYRMASL TFMFSLEPDQ DGYLGLPGRV FQQKLPEWTP NVQYYSSKEY PRLSHALHYN 240 VQGTLALPVF DPSGQSCLGV LELIMTSPKI NYAPEVDKVC KALEAVNLKS SEILDHPNNQ 300 IHTSQCFSNQ ICNEGRQNAL AEILEVLTVV CETHNLPLAQ TWVPCRHRNV LAYGGGLKKS 360 CTSFDGSCMG RICMSATEVA SYVVDAHMWG FRDACLEHHL RKGQGVSGRA FLSHSSCFCG 420 DITQFSKTEY PLVHYALMFG LKSCFSICLR STFTGDDEYI LEFFLPPSIV DYQEQKTLLG 480 ALMATMKQHF YTLKVASGIN LKDEEGLVEI IQVSRNGGFE SRIEYIQIPR PMELPPHSDA 540 MPNAGEVVAL EKLQQQSLMV HDTPKDENNS ARDDESHNPA PCPQSKEVKK TSERKRGKAE 600 KSISLEVLQQ YFAGSLKDAA KSLGVCPTTM KRICRQHGIS RWPSRKINKV NRSLSKLKRV 660 IESVQGAEGA FGISSLATSP LPVTVSSSSH PLTPEGSNQQ NFVASQPSDP QHKETNTSEG 720 QTIDTWARLE DQLHRGVLSP EEPIHEQNGY LPRFGNGLSN YRTGSGSREE SVGTPTSHGS 780 CQGSPANDSG VANNPISIPQ QQEQCVRRES PEVAFHPIDK LNISAPARPI PDTLVMVEPT 840 EEAFGGMLIA DAGSSKDLRN LCASVADAVL DEQVPEFCWS NPPDIALRQP MDSVCHTVPY 900 MSAGQEARRM TIKASYKEDI IRFRIPLSSG IVELREEVAK RLKMEVGTFD IKYMDDDREW 960 VLMACDADLQ ECVEISKSSG SNIIRLLVHD ISVNLGSSCE STGE

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MTEPDSNHPS TLFPKSTHRS APDDRTQLMD FDLDLDFPWS LDQIPSFASN PMSPFLVSTS  60
DHLGSPLWAF SEPDDDDDSK FPASTCSVLG TSNSNSVPQK PSENHKFKIL PVQSSSWGLI  120
PSENPDGYCL IKEKMAQALR YIKESSDQHV LAQVWAPVKS GGKLVLSTSG QPFVLDSQSN  180
GLHQYRMASL TFMFSLEPDQ DGYLGLPGRV FQQKLPEWTP NVQYYSSKEY PRLSHALHYN  240
VQGTLALPVF DPSGQSCLGV LELIMTSPKI NYAPEVDKVC KALEAVNLKS SEILDHPNNQ  300
IHTSQCFSNQ ICNEGRQNAL AEILEVLTVV CETHNLPLAQ TWVPCRHRNV LAYGGGLKKS  360
CTSFDGSCMG RICMSATEVA SYVVDAHMWG FRDACLEHHL RKGQGVSGRA FLSHSSCFCG  420
DITQFSKTEY PLVHYALMFG LKSCFSICLR STFTGDDEYI LEFFLPPSIV DYQEQKTLLG  480
ALMATMKQHF YTLKVASGIN LKDEEGLVEI IQVSRNGGFE SRIEYIQIPR PMELPPHSDA  540
MPNAGEVVAL EKLQQQSLMV HDTPKDENNS ARDDESHNPA PCPQSKEVKK TSERKRGKAE  600
KSISLEVLQQ YFAGSLKDAA KSLGVCPTTM KRICRQHGIS RWPSRKINKV NRSLSKLKRV  660
IESVQGAEGA FGISSLATSP LPVTVSSSSH PLTPEGSNQQ NFVASQPSDP QHKETNTSEG  720
QTIDTWARLE DQLHRGVLSP EEPIHEQNGY LPRFGNGLSN YRTGSGSREE SVGTPTSHGS  780
CQGSPANDSG VANNPISIPQ QQEQCVRRES PEVAFHPIDK LNISAPARPI PDTLVMVEPT  840
EEAFGGMLIA DAGSSKDLRN LCASVADAVL DEQVPEFCWS NPPDIALRQP MDSVCHTVPY  900
MSAGQEARRM TIKASYKEDI IRFRIPLSSG IVELREEVAK RLKMEVGTFD IKYMDDDREW  960
VLMACDADLQ ECVEISKSSG SNIIRLLVHD ISVNLGSSCE STGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein