PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931375.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 809aa MW: 94045.6 Da PI: 7.8941

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931375.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.1	2.6e-27	48	134	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dg+w ++++ ++HnHel p XP_022931375.1 48 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESESG---NSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHELLP 134 *************************************9998877...7788899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MVDVVDEMHD RDGGIISLPK KDTLFEEDID FEPHNGIEFE SHEAAYTFYQ EYAKSMGFTT 60 SIKNSRRSKK SKEFIDAKFA CSRYGVTPES ESGNSRRPSV KKTDCKASMH VKRRPDGRWI 120 IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGYRN 180 FSFPQINTSY QFDKGRYLAL DEGDAQILLE YFKRIQKENP DFFYAIDLNE EQRLRNLLWV 240 DAKSRSDYVS FTDVVSFDIS YIKTNDKLPF APFIGANHHA QSMILGCALA ADWTKPTFTW 300 LLKTWLRAMG GKAPKVIISD QDKALKLAIE EVFPNTRHCF ALWHILEKIP ETLAHVIKRN 360 ENFLAKFNKC IFKSWSDEQF DMRWWKMVTR FELQDDEWIQ SLYDDRKKWV PTYMEDIFLA 420 GMSTAQRSDS MNAFFDKYIH KKITLKEFLK QYGIILQNRY EEEAIADFDT LHKQPALKSP 480 SPWEKQMSTV YTHTIFKKFQ VEVLGVVGCR MRKEIDDGAI TTFRVQDCEK DEHFLVRWHK 540 LNSEVSCFCR LFEYKGFLCR HALIVLQMLD FRSIPPQYIL KRWTKDAKSR QPIAEGTEFR 600 QNRAQRYNDL CKKAIELSEE GSHSEECYNI AVRTLVEALK NCVNINNSKS APAESSVHAH 660 GLREEDENQG SITAKTNKKK SVNRKRKVQS EAAMILVEPQ DNLQQMDSLT SDSMTLSGYY 720 GTQQNVQGLV QLNLMEPPHD ASYYVDQQSI QGLGQLNTIA ANHDGYFGAQ HSSIHALVDY 780 RPATSYNYSL QDEQHLRSAQ LHGSSSRHT

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MVDVVDEMHD RDGGIISLPK KDTLFEEDID FEPHNGIEFE SHEAAYTFYQ EYAKSMGFTT  60
SIKNSRRSKK SKEFIDAKFA CSRYGVTPES ESGNSRRPSV KKTDCKASMH VKRRPDGRWI  120
IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGYRN  180
FSFPQINTSY QFDKGRYLAL DEGDAQILLE YFKRIQKENP DFFYAIDLNE EQRLRNLLWV  240
DAKSRSDYVS FTDVVSFDIS YIKTNDKLPF APFIGANHHA QSMILGCALA ADWTKPTFTW  300
LLKTWLRAMG GKAPKVIISD QDKALKLAIE EVFPNTRHCF ALWHILEKIP ETLAHVIKRN  360
ENFLAKFNKC IFKSWSDEQF DMRWWKMVTR FELQDDEWIQ SLYDDRKKWV PTYMEDIFLA  420
GMSTAQRSDS MNAFFDKYIH KKITLKEFLK QYGIILQNRY EEEAIADFDT LHKQPALKSP  480
SPWEKQMSTV YTHTIFKKFQ VEVLGVVGCR MRKEIDDGAI TTFRVQDCEK DEHFLVRWHK  540
LNSEVSCFCR LFEYKGFLCR HALIVLQMLD FRSIPPQYIL KRWTKDAKSR QPIAEGTEFR  600
QNRAQRYNDL CKKAIELSEE GSHSEECYNI AVRTLVEALK NCVNINNSKS APAESSVHAH  660
GLREEDENQG SITAKTNKKK SVNRKRKVQS EAAMILVEPQ DNLQQMDSLT SDSMTLSGYY  720
GTQQNVQGLV QLNLMEPPHD ASYYVDQQSI QGLGQLNTIA ANHDGYFGAQ HSSIHALVDY  780
RPATSYNYSL QDEQHLRSAQ LHGSSSRHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein