PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931230.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 240aa    MW: 26366.1 Da    PI: 6.7887
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931230.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127092123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022931230.1 70 YTCTFCRREFRSAQALGGHMNVH 92
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MAAHLDLLFQ YSSSSSFLPL SQITRDGSTP NSSSPMQTPD VVDDDDSWEV RAFAEDTADV  60
MGTTWPPRSY TCTFCRREFR SAQALGGHMN VHRRDRARLH QAPSNAIKPF SSSSSSSSST  120
SNSFIIPAHD FNGGGLCVLY PFPNPYSIRS PSSLFSMSHH SFNNFMPSTS PASAFPIRNH  180
RAGASSFPQS LSDEQAMESS NQEVDLELRL GQAPSTQTLM EKGHKISNFE AACLRKRSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-32C2H2 family protein