PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930838.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 214aa    MW: 23568.5 Da    PI: 9.9453
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930838.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-192675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa a+++a+++++g
  XP_022930838.1 26 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAYAYDNAARQFRG 75
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MVSKEKSTAK KLPSLCNTNN NARELHFRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE  60
EAAYAYDNAA RQFRGAKAKT NFPPPDELID VSPRKISQSP SPSSTVESSS SSSQEKTPST  120
EIVRSYGVAR TFPFIQPQFL HQVGGGGSGS ARPVLFMDAF VRPEFIAQGY PIRYDSARFA  180
AEIQTKSDSL SVVDCRPAKE ILNLDLNLAP PVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-33ERF family protein