PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930023.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 683aa MW: 78655.7 Da PI: 7.2623

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930023.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.1	4.5e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + ++r fvC + g++ ++ +++k +r+r+++r+gC+a ++++k+ ++w+vt + ++HnHel XP_022930023.1 63 EFYSEFAKRCGFSIRRHRTEGKdGIGKGLMRRYFVCHRAGNTPMKTPNENKPQRNRKSSRCGCQAYMRISKTMelgPAEWRVTGFANHHNHELL 156 6************999887735666799999*******999999****************99878789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MMSEETGPLL VVYDDPSDQQ SPSLEETGST DESPDETRMS LDLSNDATPY IGQRFPTHDS 60 AYEFYSEFAK RCGFSIRRHR TEGKDGIGKG LMRRYFVCHR AGNTPMKTPN ENKPQRNRKS 120 SRCGCQAYMR ISKTMELGPA EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SEMDKARIVM 180 YAKSGISAQQ MMRLMELEKG LEPGYLPFTE KDVRNLLQSF RKLEHEEESI DLLRMCQNIK 240 EKDPNFIFEF MIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRSTAF DMPLGLWVGI 300 NNYGTPCLLS CVLLREENLR SFTWALKAFM GFMNGKAPQT ILTDQNLCLK DAIAMELPTT 360 KHALCIWMIV AKFPSWFNVV LGERYNEWKR EFYRLYNLES IEDFEIGWRD MVYSFGLHTN 420 SPIANLYSTR FLWALPFLRS HFFAGMGTID QSKTINAFIQ RFLSAQTQPR QFIEQVADAV 480 DFKDQQTMQQ NLQNISLKTG APMESHAATI LTPFAFSKLQ EQLVLAAHYA SFQMDDGFLV 540 RHHTKADGGQ KVYWVPPEGI ISCSCRQFEF SGILCRHALR VLSTVNCFQI PESYLPVRWR 600 RISMPSAKLL QSTTNDHGER TQLLQSMVTT LVTESAKSRE RLDFATKQVS VLLSRVREHS 660 TSLHDLRDVS RRRVEGNIVF CIE

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MMSEETGPLL VVYDDPSDQQ SPSLEETGST DESPDETRMS LDLSNDATPY IGQRFPTHDS  60
AYEFYSEFAK RCGFSIRRHR TEGKDGIGKG LMRRYFVCHR AGNTPMKTPN ENKPQRNRKS  120
SRCGCQAYMR ISKTMELGPA EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SEMDKARIVM  180
YAKSGISAQQ MMRLMELEKG LEPGYLPFTE KDVRNLLQSF RKLEHEEESI DLLRMCQNIK  240
EKDPNFIFEF MIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRSTAF DMPLGLWVGI  300
NNYGTPCLLS CVLLREENLR SFTWALKAFM GFMNGKAPQT ILTDQNLCLK DAIAMELPTT  360
KHALCIWMIV AKFPSWFNVV LGERYNEWKR EFYRLYNLES IEDFEIGWRD MVYSFGLHTN  420
SPIANLYSTR FLWALPFLRS HFFAGMGTID QSKTINAFIQ RFLSAQTQPR QFIEQVADAV  480
DFKDQQTMQQ NLQNISLKTG APMESHAATI LTPFAFSKLQ EQLVLAAHYA SFQMDDGFLV  540
RHHTKADGGQ KVYWVPPEGI ISCSCRQFEF SGILCRHALR VLSTVNCFQI PESYLPVRWR  600
RISMPSAKLL QSTTNDHGER TQLLQSMVTT LVTESAKSRE RLDFATKQVS VLLSRVREHS  660
TSLHDLRDVS RRRVEGNIVF CIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein