PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929304.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 349aa MW: 39128.5 Da PI: 8.381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929304.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.8	4.2e-53	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g r+nra++sgyWkatg+dk+vl++ XP_022929304.1 15 LPPGFRFHPTDEELVVHYLKKKANSVPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRERKYPKGARPNRAATSGYWKATGTDKPVLAS 108 79**************************.88***********988899************************************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_022929304.1 109 ggSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143 877788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MESTDSSAGP QQPNLPPGFR FHPTDEELVV HYLKKKANSV PLPVAIIAEV DLYKFDPWEL 60 PAKATFGEQE WYFFSPRERK YPKGARPNRA ATSGYWKATG TDKPVLASGG SNQKVGVKKA 120 LVFYGGKPPK GIKTNWIMHE YRLADNKPSI NRPPGYDLAN KKNSLKLDDW VLCRIYKKNN 180 SHRGMDQERE DSMDEIMIGS IPQSLRLNDE YPKLGINYAT FLHQNDQNLL QGIVGANNND 240 GGLTNSKRLP SSLFWTQQQE QEQQDQDHSD ISSNKRLHFE NTTDGASTSV TTTHSTDNNP 300 QNSTSSFATL LNNLPQTPPL HHQAHTVLGS IGDGLFRSTY QVPGANWYS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MESTDSSAGP QQPNLPPGFR FHPTDEELVV HYLKKKANSV PLPVAIIAEV DLYKFDPWEL  60
PAKATFGEQE WYFFSPRERK YPKGARPNRA ATSGYWKATG TDKPVLASGG SNQKVGVKKA  120
LVFYGGKPPK GIKTNWIMHE YRLADNKPSI NRPPGYDLAN KKNSLKLDDW VLCRIYKKNN  180
SHRGMDQERE DSMDEIMIGS IPQSLRLNDE YPKLGINYAT FLHQNDQNLL QGIVGANNND  240
GGLTNSKRLP SSLFWTQQQE QEQQDQDHSD ISSNKRLHFE NTTDGASTSV TTTHSTDNNP  300
QNSTSSFATL LNNLPQTPPL HHQAHTVLGS IGDGLFRSTY QVPGANWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-108	NAC family protein