PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927218.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 166aa    MW: 17839.9 Da    PI: 9.681
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927218.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20857255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g
  XP_022927218.1  8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRG 57
                    7********.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MASTREAHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDG AARSLRGSKA  60
KTNFPPPLSL DLNVSSTPTT CNWPSSSSSS AAAAAPSSSS SSSAARLLLG DFLRHGARND  120
LCNVNVEASP GLVDSSDPAP NTTASFMGHV RRGLPFDLNE PPPVWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.15e-48ERF family protein