PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926936.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ZF-HD
Protein Properties Length: 287aa    MW: 31028.6 Da    PI: 8.5068
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926936.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer108.15e-3462118459
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                     ++YkeClkNhAas+Ggha+DGCgEfmps++++ ++++++kC ACgCHRnFHRre+e+
  XP_022926936.1  62 LVYKECLKNHAASMGGHALDGCGEFMPSPTATtTDPTSFKCVACGCHRNFHRREPED 118
                     68***************************999899*******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDLIPAISTA AAAITTGGGG AVKSPEFDAE TPIKFQPTTK SHSFTNGVLK RHHHTPPPPP  60
SLVYKECLKN HAASMGGHAL DGCGEFMPSP TATTTDPTSF KCVACGCHRN FHRREPEDTI  120
ATPTTTHVIE YQPHHRHHPP PPPAHRSPNS ASPPPISSSY YPSAPHMLLA LSGSMTENAG  180
GGFHHSILTP SSNSRKRFRT KFTQNQKDKM YEFAEKVGWK IQKRDEDLIQ DFCSHVGVDR  240
GVLKVWMHNN KNTLCKKDGA QNINGHGDGD DDTKINGGGA NGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-71ZF-HD family protein