PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926274.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 271aa    MW: 31335.1 Da    PI: 8.2048
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926274.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.12e-5481361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv +yL++k++++k++l +vi ++d+yk+ePwd++ + k+   e+kewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_022926274.1   8 VPPGFRFHPTDEELVGYYLERKINAQKIDL-DVIIDIDLYKMEPWDIQgNcKFGLeEQKEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKAV 101
                     69****************************.99**************943433333677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++++g++ktLvfy grap+g+ktdW+mheyrl
  XP_022926274.1 102 VS-KNRVIGMRKTLVFYIGRAPNGRKTDWIMHEYRL 136
                     **.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MENLESCVPP GFRFHPTDEE LVGYYLERKI NAQKIDLDVI IDIDLYKMEP WDIQGNCKFG  60
LEEQKEWYFF SHKDRKYPTG SRTNRATSAG FWKATGRDKA VVSKNRVIGM RKTLVFYIGR  120
APNGRKTDWI MHEYRLQTSQ LAPTQEEGWV VCKAFKKPNP NQNQGIGGWN NNGYHNQNQG  180
YYDLKTNPQF VRSPSFSDGM TPTHMLNSSC LEYPHFVPNN NHSSCFDINH LIQLPSLESP  240
SLSPSFDTNE TKRNHNVMSP SSSYPNFFPN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.18e-90NAC family protein