PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923892.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 306aa    MW: 34880.2 Da    PI: 8.9387
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923892.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.23e-38862253131
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg..... 88 
                      kkdrhski T++g+RdRR+Rls+++a++fF Lqd LG+dk skt+eWLl+qa p+i +l+++ + s+    + c++++ss+++     +     
  XP_022923892.1  86 SKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHiittTVCSNSNSSEADM---VSgidev 177
                     69*************************************************************5555522223332222222222...2244467 PP

             TCP  89 .......kaaksaakskksqksaasalnlakesrakarararertrekmr 131
                            k+++s   ++k++k++   + + ke r+kar+rar rt ek++
  XP_022923892.1 178 ggggggpKKMNSCSLKRKRDKQPR--RTMCKELRQKARERARARTMEKKN 225
                     777876555555555555555555..899******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MFFSTKNDDD HDHDHDHSFH LPISFFPFPS PFEVDEQYDD QLHNFTTNSQ KNFTIPSPDN  60
IVASNKKVGI GNSDQKKLKI PRKRLSKKDR HSKITTARGL RDRRMRLSLP VARQFFGLQD  120
LLGVDKGSKT VEWLLTQASP EILKLAKQRN CSHIITTTVC SNSNSSEADM VSGIDEVGGG  180
GGGPKKMNSC SLKRKRDKQP RRTMCKELRQ KARERARART MEKKNQIFKD CSDHHHPNHN  240
KISSCSWSSP FETCGEESGG THSYNFNPSM EVENLCSFEI MTKWSPSISS LNFLQPHEFE  300
DTDMFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199LKRKRDKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.14e-30TCP family protein