PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922869.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 592aa MW: 65640.5 Da PI: 5.0749

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922869.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.5e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ ++ vi+evd++++ePwdLp + +k++++ew+fF+++d+ky++g+r +rat +g+Wkatgkd++++ XP_022922869.1 9 LPLGFRFRPTDEELIDYYLRSKINGNHEDV-CVIREVDVCNWEPWDLPdlSILKTKDREWFFFCPQDRKYPNGHRLKRATVAGFWKATGKDRKIK 102 699**********************999.78**********96447788999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr XP_022922869.1 103 S-GTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRT 136 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MAVLTLNSLP LGFRFRPTDE ELIDYYLRSK INGNHEDVCV IREVDVCNWE PWDLPDLSIL 60 KTKDREWFFF CPQDRKYPNG HRLKRATVAG FWKATGKDRK IKSGTKLIGM KKTLVFYKGR 120 APKGKRTNWV VHEYRTTLKE LDGTNPGQNA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT 180 TTESSPGPGD SHPEQILPLD SPSLQRQAEI SDGVLSETVE HTDGSVDIHG FDSYNVEMDP 240 HPDEERKFSG PENQPLDSKL YSPLHSQLQA ELGSSGLYYS DSNYLNYGAN PNAEQLQIGA 300 EDFDFIHQML DSFVYNSDDY ALEDQQESMS LSELPNNSMA SLDNRAFGKV EADTGKALAM 360 PDFESSICLE VIDRKTPIID HMGTAAPEEG LLYNLSGSLQ ESYNYLSVVG NTDASTGIQR 420 MSRRPRSVQQ PNEFSTFQGI APRRLRLQRK LVAPSSCSSN TCSESSRWQD DDPPSISSKV 480 KKPSENKTTG GDGGSVAATV DVVKQPQVMP DADSGVGSSK ASQEVSAKLV ASDSPTIDFL 540 TGKRRLVTAL LPSILSYVSV VRLVVVALSI IFISIWKCRN REQRGYLVSP FC

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MAVLTLNSLP LGFRFRPTDE ELIDYYLRSK INGNHEDVCV IREVDVCNWE PWDLPDLSIL  60
KTKDREWFFF CPQDRKYPNG HRLKRATVAG FWKATGKDRK IKSGTKLIGM KKTLVFYKGR  120
APKGKRTNWV VHEYRTTLKE LDGTNPGQNA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT  180
TTESSPGPGD SHPEQILPLD SPSLQRQAEI SDGVLSETVE HTDGSVDIHG FDSYNVEMDP  240
HPDEERKFSG PENQPLDSKL YSPLHSQLQA ELGSSGLYYS DSNYLNYGAN PNAEQLQIGA  300
EDFDFIHQML DSFVYNSDDY ALEDQQESMS LSELPNNSMA SLDNRAFGKV EADTGKALAM  360
PDFESSICLE VIDRKTPIID HMGTAAPEEG LLYNLSGSLQ ESYNYLSVVG NTDASTGIQR  420
MSRRPRSVQQ PNEFSTFQGI APRRLRLQRK LVAPSSCSSN TCSESSRWQD DDPPSISSKV  480
KKPSENKTTG GDGGSVAATV DVVKQPQVMP DADSGVGSSK ASQEVSAKLV ASDSPTIDFL  540
TGKRRLVTAL LPSILSYVSV VRLVVVALSI IFISIWKCRN REQRGYLVSP FC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-90	NAC family protein