PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922815.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 218aa    MW: 25163.3 Da    PI: 6.9233
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922815.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.64.3e-0891111526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f+  G C+ Gd C FaHg
  XP_022922815.1  91 ACPAFRT-GSCPKGDFCEFAHG 111
                     5777776.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLQGFVFGIN DVYGHEFTAV ALPEFAYRNT RLTPQTDDTA LFNSDEFRMY AFKIQRCPKS  60
RSHDWTECPY AHRGEKAQRR DPRRFNYSAV ACPAFRTGSC PKGDFCEFAH GVFEFWLHPT  120
RYRTRACNAG RFCQRKVCFF AHSPEELRPE TKLKLHFDAP VARAALAALE YPVERKNDGV  180
SEIPVKEISD GLGNERSSEL EASEFELPHI EWISELLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.17e-69C3H family protein