PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921861.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 998aa    MW: 112761 Da    PI: 6.2236
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921861.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08382427146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r++WTt Ed+ l+  ++q G ++W   a  +g++Rt+ qc sr+q 
   XP_022921861.1 382 RNSWTTSEDKNLLFTIQQKGLNNWIELAVSLGTNRTPFQCLSRYQR 427
                      789*****************************************96 PP
2Myb_DNA-binding45.61.6e-14435479146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +  WT++Ed++l  av+ +G g+W ++a+t+  gRt+ qc +rw k
   XP_022921861.1 435 KSEWTKDEDDKLRSAVAIFGEGDWQAVASTLE-GRTGPQCSNRWKK 479
                      578*****************************.***********98 PP
3Myb_DNA-binding34.93.6e-11488533147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg +T++Ed +l+ av ++G+++W++ a+ ++ gR   qc++rw++ 
   XP_022921861.1 488 RGYFTPDEDSRLKIAVLLFGPKNWNKKAEFLP-GRNQVQCRERWFNC 533
                      799*****************************.***********996 PP
4Myb_DNA-binding39.51.3e-12540579142
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 
                      r  WT+eEd++l  a++++G   W+++a++++  Rt+++c+ 
   XP_022921861.1 540 RCEWTEEEDLRLEIAIQEHGYS-WAKVAACVP-SRTDNECRR 579
                      568*****************99.*********.*******95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 998 aa     Download sequence    
MSRRSHVDGG DKELPASEED DEDDLVDDDM ETLRRACRLA GVNHEDSINP RLSLPAAGDA  60
NLGSDSDDVD DLELLRNIQN RFSTAADEQP LSILPPVTAD EEEDDFETLR SIQRRFAAYE  120
SDILSNKPDQ SCDLDGPLKM DSDNTDVARL TSSERSSMIA FEKGSLPKAA LAFIDAIKKN  180
RSQQKFIRSK MIHLEARIEE NKKLRKRFKV LKGFQGSCRR KTTCALTQMV DPRVQLISAG  240
KPQAKDSSKK DKRLSAMCYG PAENSHVACY RTALTKFHPV DRKRWSNFER ENLGKGIRQQ  300
FQEMVLQISV DQISEIQGFS AESDDLDNIL ASIKGLDITP EKIREFLPKV NWDKLAFMYL  360
QGRSGAECEA RWLNFEDPLI NRNSWTTSED KNLLFTIQQK GLNNWIELAV SLGTNRTPFQ  420
CLSRYQRSLN ASILKSEWTK DEDDKLRSAV AIFGEGDWQA VASTLEGRTG PQCSNRWKKS  480
LDPARTKRGY FTPDEDSRLK IAVLLFGPKN WNKKAEFLPG RNQVQCRERW FNCLDPSLRR  540
CEWTEEEDLR LEIAIQEHGY SWAKVAACVP SRTDNECRRW KKLFPNQVPL LQEARKIQKV  600
ALISNFVDRE SERPALGPTD FRPVPNSHLL CNTDDPETAP KRNVRMRRMP VSRNEKSANG  660
DAPKKMKSNN QRNQADETAQ VDFANNTSSV PEVKSTKPQR KRTRHGAYTT RRKGAPKIGC  720
NSERCAEQNS DTRSLEVQLN CKEPAERINS DCPETVDENG MEVFENKAAE MHSEGVVCFS  780
EQEENQNSTG SSGVSVLSEM TNDMDEYNPS TPPDTTLLAS ITADDIIETK GVNVADKDLD  840
DSNSFSLPQS CLELRTTDSE GVDSYSVDEF TDKSHGVCKP QGRRKKNSKR SNKSQDSLVS  900
CQQAELEMSG MNELHRCNQS KKRKHSGTNT SPLGTMEAVE EVDDCTLQGF LQKRLKRTTT  960
THDKKVDGSS STPPEVDNDD NDPTLALLLK DKLKRKKH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1883924RRKKNSKRSNKSQDSLVSCQQAELEMSGMNELHRCNQSKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein