PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776538.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31531.2 Da    PI: 10.1513
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind345.11.7e-10512821301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k +lglqlmss+ erd+k     r+ nl + +++aa+++rd         m++  rd+++++        ++k++
  XP_022776538.1   1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMGERDTKSfipgRDPNL-MVTPNAAFHPRDcvvseapiaMNY-VRDSWISQ--------REKFF 83 
                     9***9999*******99..*******************99********.************999999999999.99999999........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskk 176
                     ++l+v+        +++++l++t++++sl       l++++   +r+e+   +  + e+++ +ke  + kkrq ++ pk++kakk++k    +++
  XP_022776538.1  84 NMLPVTA-------PNYGILPETSTAHSLPI-----LQPPPDSaTRDER--VVSRV-EEPPATKEGVQLKKRQGGSAPKTPKAKKPRK----PRD 159
                     ****655.......689**********9988.....7887777334443..33333.468888888999999***********99999....333 PP

       GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLek 271
                     ++++    +r+k  kks+d+ +ng ++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+Lek
  XP_022776538.1 160 NTNSTV--QRVKPAKKSMDIKINGYDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEK 252
                     444444..689************************************************************************************ PP

       GAGA_bind 272 LaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     Laae y+++ p+DL++hWA+HGtnkfvtir
  XP_022776538.1 253 LAAENYNFGDPIDLRTHWARHGTNKFVTIR 282
                     *****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM GERDTKSFIP GRDPNLMVTP NAAFHPRDCV  60
VSEAPIAMNY VRDSWISQRE KFFNMLPVTA PNYGILPETS TAHSLPILQP PPDSATRDER  120
VVSRVEEPPA TKEGVQLKKR QGGSAPKTPK AKKPRKPRDN TNSTVQRVKP AKKSMDIKIN  180
GYDMDISGIP IPVCSCTGTP QQCYRWGCGG WQSACCTTNV SMYPLPMSTK RRGARIAGRK  240
MSQGAFKKVL EKLAAENYNF GDPIDLRTHW ARHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-112BBR-BPC family protein