PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776211.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 242aa MW: 26397.6 Da PI: 5.6116

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.2	8e-56	51	155	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl XP_022776211.1 51 QLQMFWSYQrqeIERVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 145 89***998899****************************************************************************** PP NF-YC 93 vdivprdelk 102 vdivprde+k XP_022776211.1 146 VDIVPRDEIK 155 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MDSNQQAQSS SYPPQPPTSV ITPTTSSTTT TTGTATPPHP FHHLLQQQQQ QLQMFWSYQR 60 QEIERVNDFK NHQLPLARIK KIMKADEDVR MISAEAPILF AKACELFILE LTIRSWLHAE 120 ENKRRTLQKN DIAAAITRTD IFDFLVDIVP RDEIKDEAGL GGMVGTTTSG VPYFYPPMGQ 180 PAGGPPRPGG MMIGRPAVDP TAGIYAQPPS QAWQSVWQTA GADDGSYGSG ASSGQGTLDG 240 QG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	2e-87	NF-YC family protein