PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 521aa    MW: 58078.4 Da    PI: 6.1642
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.41.3e-1101505202374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPilkfs 94 
                      + L++cAeav+ +d++ a+alL++l+ +a   g+++qR+a++f+++La rla       + +  p+ +  +  s++e  a++l ++++P ++f+
  XP_022776120.1 150 LQRLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLALvlPFGPVGRVAPVMNIMDIASDKEEEAFRLVYDICPHIQFG 244
                     688*************************************************983333456666677777666799999**************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                     h++aN  Ilea+ege+ vH++D++++    +G QW  L+q+La+R+++ p +lRiT+vg        + + +g+ L+ +A+elg+++ef++ v++
  XP_022776120.1 245 HFVANLSILEAFEGESFVHVVDLGMTlglpHGYQWCHLIQSLANRAGKRPcRLRITAVGL----CVGRFNIIGQELKAYAKELGMNLEFSI-VES 334
                     **********************98763344788*************88777*********....**************************9.7** PP

            GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                     +le+l++e+++v  gE+l+Vn++lqlh +++es    +   +vL+++ +l Pkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +
  XP_022776120.1 335 NLENLRPEDIKVFDGEVLVVNSILQLHCVVKESRGALN---SVLQMIHELAPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLPKYD 426
                     ******************************88877777...8***************************************************** PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                       r+k+E++++++ei+n+v+ eg +r+erhe++ +Wr+r+++aGF+++pl+  + +qak  l k +  +gy+v e++g+lvlgWk++p+v++S+W
  XP_022776120.1 427 TRRAKMEQFYFAEEIKNIVSREGPDRVERHERVDQWRRRMSRAGFQAAPLR--MISQAKQWLGKNNvCEGYTVVEDKGCLVLGWKSKPIVAASCW 519
                     *************************************************96..789**********9**************************** PP

            GRAS 374 r 374
                     +
  XP_022776120.1 520 K 520
                     8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MAHGYLPNEF QIQDTESIDE VIGLDLKLSA MAFSSYPFKP LMGNNAAGWS LHLSEETRDT  60
KRFRRTVSIP ESIGSNCNLS SGGNSDDSLS RSSSTSSLNS LSRLQFRDHI LTYNQRYLAA  120
EAVEEAAAAM INSEESGAEE EETADGMRLL QRLIACAEAV ACRDKSHASA LLSELRANAL  180
VFGSSFQRVA SCFVQGLADR LALVLPFGPV GRVAPVMNIM DIASDKEEEA FRLVYDICPH  240
IQFGHFVANL SILEAFEGES FVHVVDLGMT LGLPHGYQWC HLIQSLANRA GKRPCRLRIT  300
AVGLCVGRFN IIGQELKAYA KELGMNLEFS IVESNLENLR PEDIKVFDGE VLVVNSILQL  360
HCVVKESRGA LNSVLQMIHE LAPKVLVLVE QDSSHNGPFF LGRFMEALHY YSAIFDSLDA  420
VLPKYDTRRA KMEQFYFAEE IKNIVSREGP DRVERHERVD QWRRRMSRAG FQAAPLRMIS  480
QAKQWLGKNN VCEGYTVVED KGCLVLGWKS KPIVAASCWK C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-76GRAS family protein