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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022776120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GRAS | ||||||||
Protein Properties | Length: 521aa MW: 58078.4 Da PI: 6.1642 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 361.4 | 1.3e-110 | 150 | 520 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPilkfs 94 + L++cAeav+ +d++ a+alL++l+ +a g+++qR+a++f+++La rla + + p+ + + s++e a++l ++++P ++f+ XP_022776120.1 150 LQRLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLALvlPFGPVGRVAPVMNIMDIASDKEEEAFRLVYDICPHIQFG 244 688*************************************************983333456666677777666799999**************** PP GRAS 95 hltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184 h++aN Ilea+ege+ vH++D++++ +G QW L+q+La+R+++ p +lRiT+vg + + +g+ L+ +A+elg+++ef++ v++ XP_022776120.1 245 HFVANLSILEAFEGESFVHVVDLGMTlglpHGYQWCHLIQSLANRAGKRPcRLRITAVGL----CVGRFNIIGQELKAYAKELGMNLEFSI-VES 334 **********************98763344788*************88777*********....**************************9.7** PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279 +le+l++e+++v gE+l+Vn++lqlh +++es + +vL+++ +l Pkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ + XP_022776120.1 335 NLENLRPEDIKVFDGEVLVVNSILQLHCVVKESRGALN---SVLQMIHELAPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLPKYD 426 ******************************88877777...8***************************************************** PP GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373 r+k+E++++++ei+n+v+ eg +r+erhe++ +Wr+r+++aGF+++pl+ + +qak l k + +gy+v e++g+lvlgWk++p+v++S+W XP_022776120.1 427 TRRAKMEQFYFAEEIKNIVSREGPDRVERHERVDQWRRRMSRAGFQAAPLR--MISQAKQWLGKNNvCEGYTVVEDKGCLVLGWKSKPIVAASCW 519 *************************************************96..789**********9**************************** PP GRAS 374 r 374 + XP_022776120.1 520 K 520 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 521 aa Download sequence |
MAHGYLPNEF QIQDTESIDE VIGLDLKLSA MAFSSYPFKP LMGNNAAGWS LHLSEETRDT 60 KRFRRTVSIP ESIGSNCNLS SGGNSDDSLS RSSSTSSLNS LSRLQFRDHI LTYNQRYLAA 120 EAVEEAAAAM INSEESGAEE EETADGMRLL QRLIACAEAV ACRDKSHASA LLSELRANAL 180 VFGSSFQRVA SCFVQGLADR LALVLPFGPV GRVAPVMNIM DIASDKEEEA FRLVYDICPH 240 IQFGHFVANL SILEAFEGES FVHVVDLGMT LGLPHGYQWC HLIQSLANRA GKRPCRLRIT 300 AVGLCVGRFN IIGQELKAYA KELGMNLEFS IVESNLENLR PEDIKVFDGE VLVVNSILQL 360 HCVVKESRGA LNSVLQMIHE LAPKVLVLVE QDSSHNGPFF LGRFMEALHY YSAIFDSLDA 420 VLPKYDTRRA KMEQFYFAEE IKNIVSREGP DRVERHERVD QWRRRMSRAG FQAAPLRMIS 480 QAKQWLGKNN VCEGYTVVED KGCLVLGWKS KPIVAASCWK C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 9e-76 | GRAS family protein |