PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775598.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 406aa MW: 43243.5 Da PI: 7.3093

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.8	1.1e-39	83	188	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 + k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa+++ tgt++++a+++ + s +ss+s+ s + XP_022775598.1 83 PLKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIASTGTGTIPANFTsLNISLRSSGSSISVPsqlrssg 177 6799*****************************************************************99987777777777555553333333 PP TCP 89 ..........k 89 + XP_022775598.1 178 fnsnlsmqqrR 188 33333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEGGGSDHHQ LHHLDHHHHH QQHHRPNFPF QLLEKKEEEN QLCSSSSSPP FLPLPASSAA 60 DQPNTACSIS SLQISPEPSK KPPLKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL 120 GHKSDGETIE WLLQQAEPAV IASTGTGTIP ANFTSLNISL RSSGSSISVP SQLRSSGFNS 180 NLSMQQRRSL FPGIGLETTP TFLNYQSSSN LNSMFQAKQE LGDNSTSLEL SETEEGTVGR 240 KRRLEQDLSS QHQMGAYLLQ SSTGAIPASH GQIPANFWMV TNSNNQVMSG DPIWTFPSVN 300 NSALYRSTMS SGLHFMNFPA PMALLPGQQL GSSSVTSGGG GGGGGGSGGS SGISEGHLNM 360 LTGMNHYRQV SGSSESESQA SGSHSHHGGG GGGGGDDRHD GTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEGGGSDHHQ LHHLDHHHHH QQHHRPNFPF QLLEKKEEEN QLCSSSSSPP FLPLPASSAA  60
DQPNTACSIS SLQISPEPSK KPPLKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL  120
GHKSDGETIE WLLQQAEPAV IASTGTGTIP ANFTSLNISL RSSGSSISVP SQLRSSGFNS  180
NLSMQQRRSL FPGIGLETTP TFLNYQSSSN LNSMFQAKQE LGDNSTSLEL SETEEGTVGR  240
KRRLEQDLSS QHQMGAYLLQ SSTGAIPASH GQIPANFWMV TNSNNQVMSG DPIWTFPSVN  300
NSALYRSTMS SGLHFMNFPA PMALLPGQQL GSSSVTSGGG GGGGGGSGGS SGISEGHLNM  360
LTGMNHYRQV SGSSESESQA SGSHSHHGGG GGGGGDDRHD GTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-60	TCP family protein