PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775373.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SRS

Protein Properties

Length: 352aa MW: 38010 Da PI: 6.352

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	228.7	1.1e-70	107	251	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 +g+ sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstW+pa+krrerqqqlaa+++ + + +++kr+re+ ++s+l++t+l+++ s XP_022775373.1 107 AGGLSCQDCGNQAKKDCLHMRCRTCCKSRGFDCQTHVKSTWIPASKRRERQQQLAALQQLQ---LRGENPKRQREN--PTSSSLACTRLPTSAS- 195 6789**************************************************96655...567888888886..7889999999998865. PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le ++P+evsseavfrcvrvss++d+++++aYqtav+igGhvfkGiLyd+G+e+ XP_022775373.1 196 -GLELGNFPAEVSSEAVFRCVRVSSIEDADDQYAYQTAVNIGGHVFKGILYDRGPES 251 .588999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAGFFSLGGR GSNGQEDQQN NPTIEIPPES WFWYKNEDIP YKGLELWQQQ ELFQRHNSSN 60 NPQDQQQQDL YSSAAGLGVG PSRSSINVSD DSSSRSAFMM MRSSGGAGGL SCQDCGNQAK 120 KDCLHMRCRT CCKSRGFDCQ THVKSTWIPA SKRRERQQQL AALQQLQLRG ENPKRQRENP 180 TSSSLACTRL PTSASGLELG NFPAEVSSEA VFRCVRVSSI EDADDQYAYQ TAVNIGGHVF 240 KGILYDRGPE SAYNIAAAGE SSSGGVLPLN LITAGPITAT NTASIAVNAS GSSVTSGSSS 300 TAAFLNPSSL YATPLNTFMA GDSHSDGFSI TILFVPEFIT VSNSLKERIW NN

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAGFFSLGGR GSNGQEDQQN NPTIEIPPES WFWYKNEDIP YKGLELWQQQ ELFQRHNSSN  60
NPQDQQQQDL YSSAAGLGVG PSRSSINVSD DSSSRSAFMM MRSSGGAGGL SCQDCGNQAK  120
KDCLHMRCRT CCKSRGFDCQ THVKSTWIPA SKRRERQQQL AALQQLQLRG ENPKRQRENP  180
TSSSLACTRL PTSASGLELG NFPAEVSSEA VFRCVRVSSI EDADDQYAYQ TAVNIGGHVF  240
KGILYDRGPE SAYNIAAAGE SSSGGVLPLN LITAGPITAT NTASIAVNAS GSSVTSGSSS  300
TAAFLNPSSL YATPLNTFMA GDSHSDGFSI TILFVPEFIT VSNSLKERIW NN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	6e-84	SRS family protein