PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774058.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 870aa MW: 96228.9 Da PI: 6.2723

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.2	2.2e-11	129	176	50	99
E..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 50 liyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ XP_022774058.1 129 IIFRGQPKRHLLTSGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLGIRRA 176 57799***************************..8899999**997 PP
2	Auxin_resp	122.9	2.3e-40	201	284	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+WrsLk XP_022774058.1 201 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSLK 284 79*******************************9789*****************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MRLSSSGLNQ QTQEGEKKCL NYELWHACAG PLVSLPPVGN RVVYFPQGHS EQVAASTNKE 60 VDAHIPNYPS LPAQLICQLH NVTMHADVET DEVYAQMTLQ PLSPSLLRIT PKPSSRVINL 120 HDYGEYLNII FRGQPKRHLL TSGWSVFVSA KRLVAGDSVL FIWNEKNQLL LGIRRANRPQ 180 TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PSEFVIPLAK YIKAVYHTRV 240 SVGMRFRMLF ETEESSVRRY MGTITGISDL DPVRWPNSHW RSLKVGWDES TAGERQPRVS 300 LWEIEPLTTF PMYPSPFPLR LKRPWPSALP SFYAFKDGDM SMNSQLMWLQ GGVGDQGIQS 360 LNFQGFGVAP LVQPRLDTSS IPGVQSDLYQ AMAAAALQEM RTVDSSKLGS QSLLQFQQPQ 420 STSNGSPALI QRQMLQQSQT QNAFLQSFQE NQTASHVQLL QQLQHPNLYN DPRQQQQQQQ 480 QQQQQQQHQQ QQQSQQSQQL PQLSVPQQIP NVNAAFPSAS ASQAQSSSLP AVASQCQQQT 540 FSDRLVNNIA TSDVSSMQSI LGSLSQAGCS NLLNVNGSNP IISSAFLSKS VAIEPQLSSG 600 ATNCVLPQVE QLGTAQSNVS ELSNLLPPFP GREYSAYIGS SDPQNFLFGV SIDSSSLMLQ 660 HGMTNLKNIR NENDSLSLPY AASNFTSASG TDFPLNSDMT TSSCVDESGY LQSSENVDQV 720 TPTRTFVKVH KSGSFGRSLD ISKFSSYDEL RCELARMFGL EGQLEDPQRS GWQLVFVDRE 780 NDILLLGDDP WQEFVNSVWY IKILSPLEVQ QMGKEGLNPS TSVPSQRLTT ITTTTTTTTT 840 NGGNHCDDYM SRQDLRSSGN GIASMGFLEY

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MRLSSSGLNQ QTQEGEKKCL NYELWHACAG PLVSLPPVGN RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPAQLICQLH NVTMHADVET DEVYAQMTLQ PLSPSLLRIT PKPSSRVINL  120
HDYGEYLNII FRGQPKRHLL TSGWSVFVSA KRLVAGDSVL FIWNEKNQLL LGIRRANRPQ  180
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PSEFVIPLAK YIKAVYHTRV  240
SVGMRFRMLF ETEESSVRRY MGTITGISDL DPVRWPNSHW RSLKVGWDES TAGERQPRVS  300
LWEIEPLTTF PMYPSPFPLR LKRPWPSALP SFYAFKDGDM SMNSQLMWLQ GGVGDQGIQS  360
LNFQGFGVAP LVQPRLDTSS IPGVQSDLYQ AMAAAALQEM RTVDSSKLGS QSLLQFQQPQ  420
STSNGSPALI QRQMLQQSQT QNAFLQSFQE NQTASHVQLL QQLQHPNLYN DPRQQQQQQQ  480
QQQQQQQHQQ QQQSQQSQQL PQLSVPQQIP NVNAAFPSAS ASQAQSSSLP AVASQCQQQT  540
FSDRLVNNIA TSDVSSMQSI LGSLSQAGCS NLLNVNGSNP IISSAFLSKS VAIEPQLSSG  600
ATNCVLPQVE QLGTAQSNVS ELSNLLPPFP GREYSAYIGS SDPQNFLFGV SIDSSSLMLQ  660
HGMTNLKNIR NENDSLSLPY AASNFTSASG TDFPLNSDMT TSSCVDESGY LQSSENVDQV  720
TPTRTFVKVH KSGSFGRSLD ISKFSSYDEL RCELARMFGL EGQLEDPQRS GWQLVFVDRE  780
NDILLLGDDP WQEFVNSVWY IKILSPLEVQ QMGKEGLNPS TSVPSQRLTT ITTTTTTTTT  840
NGGNHCDDYM SRQDLRSSGN GIASMGFLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein