PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773929.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 505aa    MW: 57303.1 Da    PI: 5.2435
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.12.8e-1061195043374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + Lle A+a+++++  ++q+l++ l+el+sp+gd+ q+l +yf++AL +r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h++
  XP_022773929.1 119 DILLETATAIADQNSGRVQQLMWMLNELSSPYGDTEQKLGSYFLQALFSRMTDSGERCYRTLASVSEKTCSFESTRKMVLKFQEVSPWTTFGHVA 213
                     689***********************************************************8888876665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..............skeeleetgerLakfAeelgvpfef 178
                     +N aI+ea+ege+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T++++++sg               ++ ++e+g+r++kfA+ +gvpf+f
  XP_022773929.1 214 CNGAIMEAFEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTIVASKSGgvsgasgaagglaaVQKVMKEIGNRMEKFARLMGVPFKF 308
                     ****************************************************99889************9999********************** PP

            GRAS 179 nvlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalf 268
                     nv++   +l +l+l+eL+++++Eala+n+v  lh++     +++++rd +++ ++sl+P++++vve+ead++ +    +F+++f e+l+++ + f
  XP_022773929.1 309 NVIHRAgDLCNLDLSELDIQEDEALAINCVGTLHSIT----AVDNRRDIMISNFRSLQPRIITVVEEEADLDVGfdglEFVKGFQECLRWFRVYF 399
                     **977779****************************8....77888999*******************9886555556***************** PP

            GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgW 362
                     ++l+++++r+s+er ++Er+  gr+ v++vac  +e++er+e + +W++r++e+GF+pv ls+++ +++++llr++k +g  + ++ ++ ++l W
  XP_022773929.1 400 EALDESFARTSNERLMLERA-AGRAMVDLVACPPSESIERRELATRWSRRFHESGFSPVILSDEVCDDVRALLRRYK-EGwSMAQCPDAGIFLSW 492
                     ********************.********************************************************.66255568899999*** PP

            GRAS 363 kdrpLvsvSaWr 374
                     kd+pLv++SaWr
  XP_022773929.1 493 KDQPLVWASAWR 504
                     ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    
MDTLFRLVSF QSSDQSFNSS RTSSSSRSSR QNHHYQQEDE ECFNFFMDED DFSSSSSKHY  60
YPYHHHQQHQ PHPYTTTTTP TTTTTNTSNI HHAFETSDFP TFSPARDIYF DFSGKWATDI  120
LLETATAIAD QNSGRVQQLM WMLNELSSPY GDTEQKLGSY FLQALFSRMT DSGERCYRTL  180
ASVSEKTCSF ESTRKMVLKF QEVSPWTTFG HVACNGAIME AFEGESKLHI IDISNTYCTQ  240
WPTLLEALAT RTDETPHLRL TTIVASKSGG VSGASGAAGG LAAVQKVMKE IGNRMEKFAR  300
LMGVPFKFNV IHRAGDLCNL DLSELDIQED EALAINCVGT LHSITAVDNR RDIMISNFRS  360
LQPRIITVVE EEADLDVGFD GLEFVKGFQE CLRWFRVYFE ALDESFARTS NERLMLERAA  420
GRAMVDLVAC PPSESIERRE LATRWSRRFH ESGFSPVILS DEVCDDVRAL LRRYKEGWSM  480
AQCPDAGIFL SWKDQPLVWA SAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein