PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773907.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 361aa MW: 40783 Da PI: 5.7346

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.4	4e-11	185	231	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK +K ++L A++Y+k+Lq XP_022773907.1 185 DHVIAERKRREKLSQRFISLSALIPGL-----KKTDKNSVLGDAIKYLKELQ 231 5999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEIASGKWLS ELEMEDPMFF PQYQMMNPID YSFDDINFQS FSSESYSSYP HIDQKISHNN 60 MNGSCINDAS HQVEDFKRPM KQLKTNSWDS SITENIPPIK ASSSSSSQII SFDNSNSSPS 120 FSQQYYGLDC DVKPKNNELG WEGNMGYVPS LISQSACKNQ SCSPKFRQVS KGAGSLTRNP 180 LHARDHVIAE RKRREKLSQR FISLSALIPG LKKTDKNSVL GDAIKYLKEL QERVTTLEEQ 240 AAKKTVESVI FVRKTQFFAD DETSSSNENF DSQSNNPFPE IEARVSDKDV LIRILCEKNK 300 GCISNIINEV EKLHLSVLNS NVLAFGQATL DITVVAQMED EFSMTVKDLV KSLRLALLKY 360 M

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEIASGKWLS ELEMEDPMFF PQYQMMNPID YSFDDINFQS FSSESYSSYP HIDQKISHNN  60
MNGSCINDAS HQVEDFKRPM KQLKTNSWDS SITENIPPIK ASSSSSSQII SFDNSNSSPS  120
FSQQYYGLDC DVKPKNNELG WEGNMGYVPS LISQSACKNQ SCSPKFRQVS KGAGSLTRNP  180
LHARDHVIAE RKRREKLSQR FISLSALIPG LKKTDKNSVL GDAIKYLKEL QERVTTLEEQ  240
AAKKTVESVI FVRKTQFFAD DETSSSNENF DSQSNNPFPE IEARVSDKDV LIRILCEKNK  300
GCISNIINEV EKLHLSVLNS NVLAFGQATL DITVVAQMED EFSMTVKDLV KSLRLALLKY  360
M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	195	ERKRRE
2	191	196	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	6e-66	bHLH family protein