PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773767.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 568aa MW: 60599.7 Da PI: 7.2425

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1e-24	191	233	2	44
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e XP_022773767.1 191 LEPGRCRRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKPVE 233 69**************************************987 PP
2	QLQ	42.2	2.4e-15	129	163	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQ+ +L +Q+++yKy+ a PvPp+Ll +i+ XP_022773767.1 129 PFTSAQWKELGRQAMIYKYMKACIPVPPDLLIPIT 163 8********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MSMIGFSVSD KAAKESSSIE AVDLGVKLQS SKLLAPWKMM MVHHDNHHRP FPPYAIGNGD 60 ADGPTGNNNR PKAGDIYDVF ASGDSAAAAS GGAVGVRTLQ PFDISPTTTL TAHTAFKSPG 120 GMAASLEFPF TSAQWKELGR QAMIYKYMKA CIPVPPDLLI PITGSTSVPV ASHSALGGGA 180 LNLRLSGRGD LEPGRCRRTD GKKWRCSRDV APDQKYCERH MHRGRPRSRK PVELPNKKTR 240 HTHTQALPSS CSTILTKNAS PSQFVGTLAQ PFQQNKTSCF LDKSSEKAAT FWPVASVSSF 300 KEPRNWDWIM NEELVSLASS DQQWHHLMQI GPTTTSSFHN ADNSSVLNQN YNKEPLNLNS 360 YANFNAAENQ QRNGCSLFFN TEIIPLEKFP EGTARGFIDA WSTGVSDDDN ANFGAETSVS 420 SDGKLYLSSL SLSVGVDNIR DDEMGPIHVG LGTSESDQNH EYASKSHLSS GLAPASWAAS 480 TPGGPLAEVL RPSMTATAAA AMEGSSIPSS PVTGNGNSCS LPLTAVSSPS GVLQRTPALL 540 SDSSGTSSPT LASSGAKPEI GLMWLKEN

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MSMIGFSVSD KAAKESSSIE AVDLGVKLQS SKLLAPWKMM MVHHDNHHRP FPPYAIGNGD  60
ADGPTGNNNR PKAGDIYDVF ASGDSAAAAS GGAVGVRTLQ PFDISPTTTL TAHTAFKSPG  120
GMAASLEFPF TSAQWKELGR QAMIYKYMKA CIPVPPDLLI PITGSTSVPV ASHSALGGGA  180
LNLRLSGRGD LEPGRCRRTD GKKWRCSRDV APDQKYCERH MHRGRPRSRK PVELPNKKTR  240
HTHTQALPSS CSTILTKNAS PSQFVGTLAQ PFQQNKTSCF LDKSSEKAAT FWPVASVSSF  300
KEPRNWDWIM NEELVSLASS DQQWHHLMQI GPTTTSSFHN ADNSSVLNQN YNKEPLNLNS  360
YANFNAAENQ QRNGCSLFFN TEIIPLEKFP EGTARGFIDA WSTGVSDDDN ANFGAETSVS  420
SDGKLYLSSL SLSVGVDNIR DDEMGPIHVG LGTSESDQNH EYASKSHLSS GLAPASWAAS  480
TPGGPLAEVL RPSMTATAAA AMEGSSIPSS PVTGNGNSCS LPLTAVSSPS GVLQRTPALL  540
SDSSGTSSPT LASSGAKPEI GLMWLKEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	5e-36	GRF family protein