PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773623.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 473aa MW: 51819.2 Da PI: 5.1185

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.6e-12	333	375	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL Av+Y+k+L XP_022773623.1 333 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAVDYLKEL 375 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MVLGANGLVW MDGEDEEHAV SSWTRNNINT SGNNEIETNE EDLNMSGASL PTFKSMLDTD 60 WYINPAMNQD LQIRELGFCS NQVDNSLLLH NPIDSSASCS PSQAFLLDPS QSHPFLPPKS 120 CFSSLLNVSC HNPFDNAFDF GSETAFIAQF QPNQTPNLMS FPQTQMGTPD FSSSSEFQGT 180 RLFTGTENAS ALSGGTSAGD FAGSANAMFM NRGKILKPLE VFPSVGSEPT LFQKRAAMRQ 240 GSGGADKLGN LDVSELRFGA EVSVANRKRH EEGDIEEANI DVSGLNYDSD ERNDDCKVEE 300 SVKNDVFNYA TSTVTGGGDH KGKKKGMPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD 360 RASILGDAVD YLKELLKRIN DLHTELESTP PGSLMPPSTS FHPLTPTPPT LPCRVKEELC 420 PSSLPSPKSQ QAKVELGKEG RAVNIHMFCA RRPGLLLSTM RALDNLGLDI QQL

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MVLGANGLVW MDGEDEEHAV SSWTRNNINT SGNNEIETNE EDLNMSGASL PTFKSMLDTD  60
WYINPAMNQD LQIRELGFCS NQVDNSLLLH NPIDSSASCS PSQAFLLDPS QSHPFLPPKS  120
CFSSLLNVSC HNPFDNAFDF GSETAFIAQF QPNQTPNLMS FPQTQMGTPD FSSSSEFQGT  180
RLFTGTENAS ALSGGTSAGD FAGSANAMFM NRGKILKPLE VFPSVGSEPT LFQKRAAMRQ  240
GSGGADKLGN LDVSELRFGA EVSVANRKRH EEGDIEEANI DVSGLNYDSD ERNDDCKVEE  300
SVKNDVFNYA TSTVTGGGDH KGKKKGMPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD  360
RASILGDAVD YLKELLKRIN DLHTELESTP PGSLMPPSTS FHPLTPTPPT LPCRVKEELC  420
PSSLPSPKSQ QAKVELGKEG RAVNIHMFCA RRPGLLLSTM RALDNLGLDI QQL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	341	KKKGMPAKNLMAERRRRKK
2	335	342	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-127	bHLH family protein