PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773609.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 477aa MW: 52445.3 Da PI: 7.2018

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.3e-24	202	245	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e XP_022773609.1 202 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKPVE 245 79***************************************987 PP
2	QLQ	56.6	7.8e-20	146	180	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTaaQ+q+L++Q ++yKy++a +PvPpeLl ++ XP_022773609.1 146 PFTAAQWQELERQTMIYKYMMATVPVPPELLISLT 180 9*****************************98775 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MGTRNNAFVD KEKGFGRSPD QCDVGLGLRM QQQVDESCPN KSFMPMPHHQ HHHHLHNSSH 60 HQLSSSSCCG DGFDGGACGG GPIVCNTSNQ VPCTGDIYDV ISAASASVSA AAVVLKSLHH 120 HPFNANPSFP HNSSGEIAAP VNARVPFTAA QWQELERQTM IYKYMMATVP VPPELLISLT 180 RNSSNVTKGS LELGFSSNIS SDPEPWRCRR TDGKKWRCSR DVAPDQKYCE RHSHKSRPRS 240 RKPVELPNHT INKHDQKSHT LNMASDSSKQ AHKNSHFINQ TDPHLFTASF DQPRCLEWFM 300 KGETTVPIAS ISNPDWQHQQ HHKDHRVNLQ AHQNLNEQFN TSLASLGGTL NLNQTHSQET 360 RSFIDAWSIA EREVAEMDGI ESKRPVSSNE KLPLSSLTLS MSGGNGNHQE EDNENSEMGA 420 FGIMGLAKEN VRTLRPPQMA DPISWMGSPP GGPLAEALCL GIASSQSTNT SSCSKST

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MGTRNNAFVD KEKGFGRSPD QCDVGLGLRM QQQVDESCPN KSFMPMPHHQ HHHHLHNSSH  60
HQLSSSSCCG DGFDGGACGG GPIVCNTSNQ VPCTGDIYDV ISAASASVSA AAVVLKSLHH  120
HPFNANPSFP HNSSGEIAAP VNARVPFTAA QWQELERQTM IYKYMMATVP VPPELLISLT  180
RNSSNVTKGS LELGFSSNIS SDPEPWRCRR TDGKKWRCSR DVAPDQKYCE RHSHKSRPRS  240
RKPVELPNHT INKHDQKSHT LNMASDSSKQ AHKNSHFINQ TDPHLFTASF DQPRCLEWFM  300
KGETTVPIAS ISNPDWQHQQ HHKDHRVNLQ AHQNLNEQFN TSLASLGGTL NLNQTHSQET  360
RSFIDAWSIA EREVAEMDGI ESKRPVSSNE KLPLSSLTLS MSGGNGNHQE EDNENSEMGA  420
FGIMGLAKEN VRTLRPPQMA DPISWMGSPP GGPLAEALCL GIASSQSTNT SSCSKST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	3e-45	GRF family protein