PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773594.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 473aa MW: 53001.6 Da PI: 7.2224

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.9	8.6e-14	300	345	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YIk+L XP_022773594.1 300 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLSDAVSYIKEL 345 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MSSSSSSSLI TFGQDASPTL QQRLQFLVQS GPGWWIYSIF WQASRDAHGH LDLSWGDGYF 60 RGTRDFTGKS SDKLSQSKFV SKFDRKRSGK EVQALFNEEM DIERMVDGDV TDYEWYYTVS 120 MTRSFVIGDG ILGKTFGSGS YTWLSGDQEL QLYECERVRE ARMRGIQTLV CLSTSFGVVE 180 LGSSEIIKED WGLVQLSKSI FGSEINCLGS KQPGQESHIQ ISTRSVPFLN FGMVSGEQKQ 240 CVVEEKQQGE PKKETTGLGR SSSDSGADSD GNFASAYKEF NARLKKRGRK PGSGKETPLN 300 HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLSDAVS YIKELRSTIN ELEAKLQVQS 360 LKSKLNEISV FDNQSITSTL DNTTRSSNFG PKTMEVDVKI VGSEAMIRVQ SPDVNYPATR 420 LMDALRDLEL HVHHASISNV NELVLQDVVV RVPTGFVSEE VLRTAILQRC RLN

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MSSSSSSSLI TFGQDASPTL QQRLQFLVQS GPGWWIYSIF WQASRDAHGH LDLSWGDGYF  60
RGTRDFTGKS SDKLSQSKFV SKFDRKRSGK EVQALFNEEM DIERMVDGDV TDYEWYYTVS  120
MTRSFVIGDG ILGKTFGSGS YTWLSGDQEL QLYECERVRE ARMRGIQTLV CLSTSFGVVE  180
LGSSEIIKED WGLVQLSKSI FGSEINCLGS KQPGQESHIQ ISTRSVPFLN FGMVSGEQKQ  240
CVVEEKQQGE PKKETTGLGR SSSDSGADSD GNFASAYKEF NARLKKRGRK PGSGKETPLN  300
HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLSDAVS YIKELRSTIN ELEAKLQVQS  360
LKSKLNEISV FDNQSITSTL DNTTRSSNFG PKTMEVDVKI VGSEAMIRVQ SPDVNYPATR  420
LMDALRDLEL HVHHASISNV NELVLQDVVV RVPTGFVSEE VLRTAILQRC RLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	311	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-63	bHLH family protein