PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773389.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 597aa MW: 65824.6 Da PI: 6.8925

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.9	7.5e-30	75	159	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++rs+k+Ckek+en+ k++k++k+g+ +++ + +t+++fdqlea XP_022773389.1 75 RWPRQETLALLKIRSDMDVTFRDASIKGPLWEEVSRKLAELGYQRSAKKCKEKFENVYKYHKRTKDGRTGKS--DGKTYRFFDQLEA 159 8******************************************************************964..5557*****85 PP
2	trihelix	102.3	3.7e-32	422	506	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev aLi++r+++e +++++ k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+k+++kkr +e+s+tcpyf ql+ XP_022773389.1 422 RWPKVEVEALIKLRSSLEAKYQDSGPKGPLWEEISAAMKKLGYNRNAKRCKEKWENINKYFKKVKDSNKKR-PEDSKTCPYFYQLD 506 8*******************************************************************8.99********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MLGGGGTSAS VVGSSGGGDT GGNIAAAAAA AATVSSSSEA AITMLGSNEN NNNSNSGEDD 60 RGRIDEGDRS FGGNRWPRQE TLALLKIRSD MDVTFRDASI KGPLWEEVSR KLAELGYQRS 120 AKKCKEKFEN VYKYHKRTKD GRTGKSDGKT YRFFDQLEAL ENHPSIQSPA AAAAAAPPPP 180 QLKPQAQTAM PAANPPSLSH VTVPSTTLVS LSQNIAPPNT NLTVPSLPST NPTIPSFPNI 240 LADLMSNSTS SSTSSDLKLE DRRKRKRKWK DFFERKMKEM IQKQEEMQKN FLEAIEKREH 300 ERMVSEEAWR MQEMARINRE REILAQERLI AAEKNAAVLA FLQKLSEQQN PEQAQNNPLP 360 SQQPQPPLQA SPQPLSAVAP AAPPAAAVVP ASAPPLVPLP TVNLDVSKTD NGDPSYTPSS 420 SRWPKVEVEA LIKLRSSLEA KYQDSGPKGP LWEEISAAMK KLGYNRNAKR CKEKWENINK 480 YFKKVKDSNK KRPEDSKTCP YFYQLDVLYR EKNKHDSSSN QLKPENSVPL MVRPVQQWPP 540 SSSEPDQRQH DHVMEDVESE QNQDEDDNDC YDEEVDEGAG GGFKIVASKP VSMGTGD

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MLGGGGTSAS VVGSSGGGDT GGNIAAAAAA AATVSSSSEA AITMLGSNEN NNNSNSGEDD  60
RGRIDEGDRS FGGNRWPRQE TLALLKIRSD MDVTFRDASI KGPLWEEVSR KLAELGYQRS  120
AKKCKEKFEN VYKYHKRTKD GRTGKSDGKT YRFFDQLEAL ENHPSIQSPA AAAAAAPPPP  180
QLKPQAQTAM PAANPPSLSH VTVPSTTLVS LSQNIAPPNT NLTVPSLPST NPTIPSFPNI  240
LADLMSNSTS SSTSSDLKLE DRRKRKRKWK DFFERKMKEM IQKQEEMQKN FLEAIEKREH  300
ERMVSEEAWR MQEMARINRE REILAQERLI AAEKNAAVLA FLQKLSEQQN PEQAQNNPLP  360
SQQPQPPLQA SPQPLSAVAP AAPPAAAVVP ASAPPLVPLP TVNLDVSKTD NGDPSYTPSS  420
SRWPKVEVEA LIKLRSSLEA KYQDSGPKGP LWEEISAAMK KLGYNRNAKR CKEKWENINK  480
YFKKVKDSNK KRPEDSKTCP YFYQLDVLYR EKNKHDSSSN QLKPENSVPL MVRPVQQWPP  540
SSSEPDQRQH DHVMEDVESE QNQDEDDNDC YDEEVDEGAG GGFKIVASKP VSMGTGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	262	267	RRKRKR
2	262	268	RRKRKRK
3	263	268	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-124	Trihelix family protein