PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773388.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 449aa MW: 51603.4 Da PI: 6.3746

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773388.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.4	2.6e-25	121	214	1	82
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+++v++Li+a+++++e++ + +kk++W++vsk+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ +++ XP_022773388.1 121 KWTDKMVRLLITAVSYIGEDVVGEYgggmrrkfavlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVEKPSLL 214 7************888887643223445556777*******************************************9558888777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MEGNLSQGGM IPDGGSYGGL DLEGSMRVHH HAQHPHNIHH HHHPNPRQGA SVHPSIHEGF 60 PLTMGTLQNC DQTISMIDYN KGGRGKSSLS DEDEPSFTEE GVDGHNDGTK GKKGSPWQRV 120 KWTDKMVRLL ITAVSYIGED VVGEYGGGMR RKFAVLQKKG KWKSVSKVMA ERGYHVSPQQ 180 CEDKFNDLNK RYKKLNDMLG RGTSCQVVEK PSLLEVIGYL TEKEKDDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPPDPQLQ HSLQLALRSR DDNENDDARR HQHDDLDDDD DDDHDMETDD 300 HDEFEEDHAS HGDKRVMYGV LGGSAKRSKQ GQVNEDACFR NPLNSQDCNK SSFSYPPVTQ 360 ADMNQVPPDN PRAAWLQKQW IESRSLQLEE QKLQIQVEML ELEKQRFKWQ RFSKKRDREL 420 EKMRMENEKM KLENEQMALE LKRKELAAD

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MEGNLSQGGM IPDGGSYGGL DLEGSMRVHH HAQHPHNIHH HHHPNPRQGA SVHPSIHEGF  60
PLTMGTLQNC DQTISMIDYN KGGRGKSSLS DEDEPSFTEE GVDGHNDGTK GKKGSPWQRV  120
KWTDKMVRLL ITAVSYIGED VVGEYGGGMR RKFAVLQKKG KWKSVSKVMA ERGYHVSPQQ  180
CEDKFNDLNK RYKKLNDMLG RGTSCQVVEK PSLLEVIGYL TEKEKDDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPPDPQLQ HSLQLALRSR DDNENDDARR HQHDDLDDDD DDDHDMETDD  300
HDEFEEDHAS HGDKRVMYGV LGGSAKRSKQ GQVNEDACFR NPLNSQDCNK SSFSYPPVTQ  360
ADMNQVPPDN PRAAWLQKQW IESRSLQLEE QKLQIQVEML ELEKQRFKWQ RFSKKRDREL  420
EKMRMENEKM KLENEQMALE LKRKELAAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-178	Trihelix family protein