PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773042.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 345aa    MW: 37843.6 Da    PI: 4.3875
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.7e-16204240135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022773042.1 204 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 240
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MATANPQPRP FEEHERGTIQ IEDDDGDYED DAMDDEEDAN VNSVNVVEHG IGVVGGGGGA  60
GEGVVMASRT SELSLSFEGE VFVFPAITPE KVQAVLLLLG GRDIPTGVPT IEVPFDQNNR  120
DIGNIPNRSN LSRRIASLVR FREKRKERCF DKKIRYTIRR EVAQRMHRKN GQFASLKEST  180
SSWDSSQAGL QDGTPRPETV FWRCQHCGVS ENNTPAMRRG PAGPRTLCNA CGLMWANKGT  240
LRDLSKGGRN ISIDQTEPET PVDVKPSIME GDFSGNQDEH GNPSKEVTDG SNNASVNPDD  300
KDLHESAEDL TNSLPMGIVH PFTDDDEQEP LVEPANPSDT ETDFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-70GATA family protein