PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773035.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 671aa    MW: 74719 Da    PI: 6.2708
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.31e-1292896561374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lL++c+ea+ s++ +++++++a+l +lasp+ +++ Rlaay+teALa r++r +++++++ +p+e + +  +++ +al+l++++sPi+kf h
  XP_022773035.1 289 LVHLLTACVEAIGSKNIAAINHFIAKLGDLASPRESAISRLAAYYTEALALRVTRLWPRIFQITTPRELD-RADDDNGTALRLLNQISPIPKFVH 382
                     68**************************************************************999998.5678888999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++R+Tg+g+    sk++l+etg+rLa fAe+l++pfef++ v++rled++
  XP_022773035.1 383 FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRVTGIGE----SKQQLNETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 472
                     ******************************************************....9**************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk++E++aVn+v+qlh++l +    +   +++L +++s++P+vv+++eqea+hn  s+ +r++++l+yysalfds+++ lp +s  rik+
  XP_022773035.1 473 LWMLHVKENESVAVNCVFQLHKTLYDGNGGA--LRDFLGVIRSTNPTVVIMAEQEAEHNVLSLEARVTNSLRYYSALFDSVDSRLPLDSPVRIKI 565
                     ************************6554444..589*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee...sgslvlgWkdrpLvsvSaWr 374
                     E++ ++rei+n++aceg++r+erhe++e+Wr+ le+ GF+ + +se++  q ++ll++++ + y+v+++     +l+l W d+pL+svSaW+
  XP_022773035.1 566 EEM-FAREIKNIIACEGSDRFERHESFETWRKLLEHGGFRCMGISERELLQSQMLLKMYSCENYSVKKQgqdGSALTLIWLDQPLYSVSAWT 656
                     ***.********************************************************999****6555255566**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MLAGCSSSTL LSPRHRLRSE ASAQFQACHF QTSMSTQRLD LPCSFSRKDT SRSQPIRPVG  60
LSVEKPTESK TSGCSLKQNI RLPPLTTTRQ NPFEGRREIK DEFWKKGTSL KRFAEQGLID  120
ESVINRAKRK KGSSDNEISG HIHECGGDNL GLAQLGAGNF WFQQSFAGQN APQVPFSLTC  180
SGDEERVYFV PGEVISPPLP LSNNPWIESV ITEITDVGEK DVETIHRPAK EASGSSTSSE  240
NHSLGLRLNE QAAEYEAGNG SGNPYPHEYA GLGAYEEGNS HGEHQGFELV HLLTACVEAI  300
GSKNIAAINH FIAKLGDLAS PRESAISRLA AYYTEALALR VTRLWPRIFQ ITTPRELDRA  360
DDDNGTALRL LNQISPIPKF VHFTSNEILL RAFEGKDRVH IIDFDIKQGL QWPSLFQSLA  420
SRTNPPSHVR VTGIGESKQQ LNETGDRLAG FAEALNLPFE FHPVVDRLED VRLWMLHVKE  480
NESVAVNCVF QLHKTLYDGN GGALRDFLGV IRSTNPTVVI MAEQEAEHNV LSLEARVTNS  540
LRYYSALFDS VDSRLPLDSP VRIKIEEMFA REIKNIIACE GSDRFERHES FETWRKLLEH  600
GGFRCMGISE RELLQSQMLL KMYSCENYSV KKQGQDGSAL TLIWLDQPLY SVSAWTPIDV  660
AGSSSSFSQP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein